Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIK3C3Q8NEB9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 PCDHB18P-201ENST00000524813 2368 ntBASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 AC116351.2-201ENST00000606540 1585 ntBASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PIK3C3Q8NEB9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 BX276092.2-201ENST00000417668 665 ntBASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 BCL2-203ENST00000589955 5011 ntBASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 AP000997.3-201ENST00000623333 2250 ntBASIC17.96■□□□□ 0.47
PIK3C3Q8NEB9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
PIK3C3Q8NEB9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 AC141586.3-201ENST00000562166 1838 ntBASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 AC090164.3-201ENST00000610780 2143 ntBASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PIK3C3Q8NEB9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms