Protein–RNA interactions for Protein: Q8NDG6

TDRD9, ATP-dependent RNA helicase TDRD9, humanhuman

Known RBP Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD9Q8NDG6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC31.7■■■□□ 2.67
TDRD9Q8NDG6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
TDRD9Q8NDG6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
TDRD9Q8NDG6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC31.7■■■□□ 2.67
TDRD9Q8NDG6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC31.7■■■□□ 2.67
TDRD9Q8NDG6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC31.7■■■□□ 2.67
TDRD9Q8NDG6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
TDRD9Q8NDG6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
TDRD9Q8NDG6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC31.7■■■□□ 2.66
TDRD9Q8NDG6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TDRD9Q8NDG6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TDRD9Q8NDG6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC31.69■■■□□ 2.66
TDRD9Q8NDG6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC31.69■■■□□ 2.66
TDRD9Q8NDG6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC31.69■■■□□ 2.66
TDRD9Q8NDG6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC31.69■■■□□ 2.66
TDRD9Q8NDG6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC31.69■■■□□ 2.66
TDRD9Q8NDG6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TDRD9Q8NDG6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TDRD9Q8NDG6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TDRD9Q8NDG6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TDRD9Q8NDG6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 AC138894.3-201ENST00000603787 634 ntBASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 AL023284.2-201ENST00000405850 579 ntBASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 RNA5SP419-201ENST00000515908 135 ntBASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC31.68■■■□□ 2.66
TDRD9Q8NDG6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 AL353801.3-201ENST00000609898 542 ntBASIC31.67■■■□□ 2.66
TDRD9Q8NDG6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 PENK-208ENST00000523051 772 ntTSL 5 BASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 GOLGA2P11-201ENST00000562660 1621 ntBASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
TDRD9Q8NDG6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 AL590627.1-203ENST00000421194 1026 ntBASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC31.65■■■□□ 2.66
TDRD9Q8NDG6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TDRD9Q8NDG6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TDRD9Q8NDG6 MIR574-201ENST00000385209 96 ntBASIC31.64■■■□□ 2.66
TDRD9Q8NDG6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC31.64■■■□□ 2.66
TDRD9Q8NDG6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC31.64■■■□□ 2.66
TDRD9Q8NDG6 MIR3917-201ENST00000580971 93 ntBASIC31.64■■■□□ 2.66
TDRD9Q8NDG6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
TDRD9Q8NDG6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TDRD9Q8NDG6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.65
TDRD9Q8NDG6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 LINC01711-201ENST00000598340 967 ntBASIC31.63■■■□□ 2.65
TDRD9Q8NDG6 AF228730.7-201ENST00000641842 219 ntBASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms