Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 AL512353.2-201ENST00000448759 1962 ntBASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 AC007613.1-201ENST00000572811 2597 ntBASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC01561Q8N1V8 EFTUD1P1-204ENST00000560401 1798 ntBASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 SDHAP1-207ENST00000440850 2000 ntBASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 WIZP1-201ENST00000531444 2299 ntBASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 TSPY21P-201ENST00000433481 731 ntBASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 KRT18P16-201ENST00000510337 1294 ntBASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 MKRN4P-201ENST00000444706 1521 ntBASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01561Q8N1V8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms