Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
XRN1Q8IZH2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
XRN1Q8IZH2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
XRN1Q8IZH2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
XRN1Q8IZH2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC26.7■■□□□ 1.86
XRN1Q8IZH2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
XRN1Q8IZH2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
XRN1Q8IZH2 AP002469.2-201ENST00000531724 424 ntBASIC26.7■■□□□ 1.86
XRN1Q8IZH2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC26.7■■□□□ 1.86
XRN1Q8IZH2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
XRN1Q8IZH2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.7■■□□□ 1.86
XRN1Q8IZH2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC26.7■■□□□ 1.86
XRN1Q8IZH2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC26.69■■□□□ 1.86
XRN1Q8IZH2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
XRN1Q8IZH2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 AL160237.2-201ENST00000556165 472 ntBASIC26.68■■□□□ 1.86
XRN1Q8IZH2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 AC006538.3-201ENST00000612495 578 ntBASIC26.68■■□□□ 1.86
XRN1Q8IZH2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC26.68■■□□□ 1.86
XRN1Q8IZH2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 TOB2P1-201ENST00000469761 992 ntBASIC26.67■■□□□ 1.86
XRN1Q8IZH2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
XRN1Q8IZH2 AL391807.1-203ENST00000604392 2365 ntBASIC26.66■■□□□ 1.86
XRN1Q8IZH2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 MIR662-201ENST00000384847 95 ntBASIC26.66■■□□□ 1.86
XRN1Q8IZH2 AL023284.2-201ENST00000405850 579 ntBASIC26.66■■□□□ 1.86
XRN1Q8IZH2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 MIR3917-201ENST00000580971 93 ntBASIC26.66■■□□□ 1.86
XRN1Q8IZH2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
XRN1Q8IZH2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
XRN1Q8IZH2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
XRN1Q8IZH2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
XRN1Q8IZH2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
XRN1Q8IZH2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
XRN1Q8IZH2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC26.65■■□□□ 1.86
XRN1Q8IZH2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC26.65■■□□□ 1.86
XRN1Q8IZH2 AC020907.5-201ENST00000624372 1936 ntBASIC26.65■■□□□ 1.86
XRN1Q8IZH2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC26.65■■□□□ 1.86
XRN1Q8IZH2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
XRN1Q8IZH2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
XRN1Q8IZH2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC26.65■■□□□ 1.86
XRN1Q8IZH2 TSPY22P-201ENST00000427496 604 ntBASIC26.65■■□□□ 1.86
XRN1Q8IZH2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC26.65■■□□□ 1.86
XRN1Q8IZH2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms