Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 AC008040.2-201ENST00000461049 708 ntBASIC20.34■□□□□ 0.85
RNF135Q8IUD6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 VENTXP5-201ENST00000523979 775 ntBASIC20.34■□□□□ 0.85
RNF135Q8IUD6 AL441883.1-201ENST00000566170 1045 ntBASIC20.34■□□□□ 0.85
RNF135Q8IUD6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 AIRN-201ENST00000601203 4374 ntBASIC20.34■□□□□ 0.85
RNF135Q8IUD6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF135Q8IUD6 AC096733.2-201ENST00000609937 1394 ntBASIC20.34■□□□□ 0.85
RNF135Q8IUD6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF135Q8IUD6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF135Q8IUD6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF135Q8IUD6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF135Q8IUD6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF135Q8IUD6 PVRIG2P-201ENST00000435460 978 ntBASIC20.33■□□□□ 0.85
RNF135Q8IUD6 AP000347.1-202ENST00000435868 847 ntBASIC20.33■□□□□ 0.85
RNF135Q8IUD6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF135Q8IUD6 FDX1P1-201ENST00000449115 551 ntBASIC20.33■□□□□ 0.85
RNF135Q8IUD6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF135Q8IUD6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF135Q8IUD6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF135Q8IUD6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF135Q8IUD6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF135Q8IUD6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF135Q8IUD6 KRT8P20-201ENST00000423953 1409 ntBASIC20.33■□□□□ 0.84
RNF135Q8IUD6 AC092338.2-201ENST00000568827 1415 ntBASIC20.33■□□□□ 0.84
RNF135Q8IUD6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF135Q8IUD6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF135Q8IUD6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF135Q8IUD6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF135Q8IUD6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF135Q8IUD6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 PRSS44-201ENST00000515154 1146 ntBASIC20.32■□□□□ 0.84
RNF135Q8IUD6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 AL136038.3-201ENST00000561909 1096 ntBASIC20.32■□□□□ 0.84
RNF135Q8IUD6 AL023973.1-201ENST00000624619 620 ntBASIC20.32■□□□□ 0.84
RNF135Q8IUD6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF135Q8IUD6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 AL512604.3-201ENST00000569583 964 ntBASIC20.31■□□□□ 0.84
RNF135Q8IUD6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF135Q8IUD6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
RNF135Q8IUD6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms