Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 RPPH1-201ENST00000516869 333 ntBASIC19.16■□□□□ 0.66
LDB1Q86U70 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.16■□□□□ 0.66
LDB1Q86U70 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.16■□□□□ 0.66
LDB1Q86U70 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.16■□□□□ 0.66
LDB1Q86U70 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
LDB1Q86U70 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.15■□□□□ 0.66
LDB1Q86U70 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LDB1Q86U70 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 KRT18P29-201ENST00000397031 1267 ntBASIC19.15■□□□□ 0.66
LDB1Q86U70 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.15■□□□□ 0.66
LDB1Q86U70 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.15■□□□□ 0.66
LDB1Q86U70 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
LDB1Q86U70 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LDB1Q86U70 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 RNF165-205ENST00000588679 2904 ntBASIC19.15■□□□□ 0.66
LDB1Q86U70 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LDB1Q86U70 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB1Q86U70 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LDB1Q86U70 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.15■□□□□ 0.66
LDB1Q86U70 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.15■□□□□ 0.66
LDB1Q86U70 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.14■□□□□ 0.66
LDB1Q86U70 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
LDB1Q86U70 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
LDB1Q86U70 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LDB1Q86U70 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB1Q86U70 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
LDB1Q86U70 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB1Q86U70 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.14■□□□□ 0.65
LDB1Q86U70 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.14■□□□□ 0.65
LDB1Q86U70 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.14■□□□□ 0.65
LDB1Q86U70 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.14■□□□□ 0.65
LDB1Q86U70 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
LDB1Q86U70 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB1Q86U70 PRORSD1P-201ENST00000295112 541 ntBASIC19.14■□□□□ 0.65
LDB1Q86U70 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LDB1Q86U70 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LDB1Q86U70 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB1Q86U70 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB1Q86U70 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.14■□□□□ 0.65
LDB1Q86U70 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.14■□□□□ 0.65
LDB1Q86U70 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LDB1Q86U70 ITM2C-210ENST00000620962 501 ntBASIC19.14■□□□□ 0.65
LDB1Q86U70 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB1Q86U70 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.14■□□□□ 0.65
LDB1Q86U70 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB1Q86U70 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
LDB1Q86U70 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB1Q86U70 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB1Q86U70 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.14■□□□□ 0.65
LDB1Q86U70 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB1Q86U70 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB1Q86U70 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB1Q86U70 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LDB1Q86U70 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.13■□□□□ 0.65
LDB1Q86U70 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB1Q86U70 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB1Q86U70 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LDB1Q86U70 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LDB1Q86U70 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.13■□□□□ 0.65
LDB1Q86U70 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LDB1Q86U70 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.13■□□□□ 0.65
LDB1Q86U70 AL160286.2-201ENST00000567150 934 ntBASIC19.13■□□□□ 0.65
LDB1Q86U70 AL359736.2-201ENST00000621992 437 ntBASIC19.13■□□□□ 0.65
LDB1Q86U70 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LDB1Q86U70 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB1Q86U70 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB1Q86U70 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB1Q86U70 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB1Q86U70 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.13■□□□□ 0.65
LDB1Q86U70 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB1Q86U70 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
LDB1Q86U70 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 AC093503.3-201ENST00000624917 2352 ntBASIC19.12■□□□□ 0.65
LDB1Q86U70 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LDB1Q86U70 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LDB1Q86U70 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 IRX1P1-201ENST00000438849 1838 ntBASIC19.12■□□□□ 0.65
LDB1Q86U70 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.12■□□□□ 0.65
LDB1Q86U70 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LDB1Q86U70 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB1Q86U70 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms