Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP1BQ7LBR1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 TFP1-202ENST00000475455 1573 ntBASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 AC112907.3-201ENST00000577781 2400 ntBASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 AP002982.1-201ENST00000492365 877 ntBASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 Z99916.2-201ENST00000604037 246 ntBASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP1BQ7LBR1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 AC233702.5-201ENST00000584107 538 ntBASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 AC098818.2-201ENST00000564925 2320 ntBASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP1BQ7LBR1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms