Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 AC090340.1-201ENST00000620778 4980 ntBASIC17.26■□□□□ 0.35
LRFN4Q6PJG9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 PRKY-204ENST00000533551 1019 ntBASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN4Q6PJG9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 LTB4R2-202ENST00000528054 3092 ntBASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 AC006058.3-201ENST00000606217 1069 ntBASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.24■□□□□ 0.35
LRFN4Q6PJG9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 KRT8P8-201ENST00000434750 1448 ntBASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 POU5F1P3-201ENST00000428824 1078 ntBASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 AC073648.6-201ENST00000641589 218 ntBASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 NBPF21P-201ENST00000425093 1451 ntBASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRFN4Q6PJG9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN4Q6PJG9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.22■□□□□ 0.35
LRFN4Q6PJG9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.22■□□□□ 0.35
LRFN4Q6PJG9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN4Q6PJG9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRFN4Q6PJG9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms