Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 AL596275.1-201ENST00000423464 877 ntBASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 AC026271.3-201ENST00000571884 352 ntBASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 REXO1L10P-201ENST00000615707 1290 ntBASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 AC011298.2-201ENST00000617989 482 ntBASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 REXO1L12P-201ENST00000622156 912 ntBASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCSMST1Q4G0I0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCSMST1Q4G0I0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.64■□□□□ 0.58
CCSMST1Q4G0I0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.64■□□□□ 0.58
CCSMST1Q4G0I0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 AL161938.1-201ENST00000569833 2180 ntBASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 AC004951.3-201ENST00000418645 1148 ntBASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 TSPY23P-201ENST00000440136 739 ntBASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 AC130371.2-201ENST00000619443 611 ntBASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.64■□□□□ 0.57
CCSMST1Q4G0I0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 TSPY15P-201ENST00000457163 923 ntBASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 AC116562.2-201ENST00000507042 360 ntBASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 AP003071.4-201ENST00000562276 1284 ntBASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 MIR4497-201ENST00000583208 89 ntBASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 IRX1P1-201ENST00000438849 1838 ntBASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCSMST1Q4G0I0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 AC087289.5-201ENST00000586076 3175 ntBASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCSMST1Q4G0I0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms