Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.05■■□□□ 1.28
PDS5AQ29RF7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 LINC01238-205ENST00000567549 1107 ntBASIC23.05■■□□□ 1.28
PDS5AQ29RF7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 TSPY5P-201ENST00000426936 936 ntBASIC23.04■■□□□ 1.28
PDS5AQ29RF7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 AC008622.2-201ENST00000617006 1229 ntBASIC23.04■■□□□ 1.28
PDS5AQ29RF7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDS5AQ29RF7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 ARMC10P1-201ENST00000313754 855 ntBASIC23.03■■□□□ 1.28
PDS5AQ29RF7 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.03■■□□□ 1.28
PDS5AQ29RF7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 AP000523.1-201ENST00000398242 1049 ntBASIC23.03■■□□□ 1.28
PDS5AQ29RF7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDS5AQ29RF7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 KRT8P3-201ENST00000519669 1449 ntBASIC23.02■■□□□ 1.28
PDS5AQ29RF7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 AC011558.1-201ENST00000623459 338 ntBASIC23.02■■□□□ 1.28
PDS5AQ29RF7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.02■■□□□ 1.28
PDS5AQ29RF7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.02■■□□□ 1.27
PDS5AQ29RF7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 TEX21P-204ENST00000641479 1693 ntBASIC23.01■■□□□ 1.27
PDS5AQ29RF7 SLC25A24-204ENST00000569674 2357 ntBASIC23.01■■□□□ 1.27
PDS5AQ29RF7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.01■■□□□ 1.27
PDS5AQ29RF7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 Z82202.1-201ENST00000623446 1880 ntBASIC23.01■■□□□ 1.27
PDS5AQ29RF7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDS5AQ29RF7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PDS5AQ29RF7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms