Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 LINC01465-201ENST00000408887 1940 ntBASIC12.68□□□□□ -0.38
SYCNQ0VAF6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 AP003097.1-201ENST00000530657 1135 ntBASIC12.68□□□□□ -0.38
SYCNQ0VAF6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 AC004264.1-201ENST00000608354 794 ntBASIC12.68□□□□□ -0.38
SYCNQ0VAF6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SYCNQ0VAF6 AP000974.1-201ENST00000623909 2387 ntBASIC12.67□□□□□ -0.38
SYCNQ0VAF6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SYCNQ0VAF6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms