Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RPL38P63173 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.47■□□□□ 0.55
RPL38P63173 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.47■□□□□ 0.55
RPL38P63173 NEFHP1-201ENST00000412845 2629 ntBASIC18.47■□□□□ 0.55
RPL38P63173 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.47■□□□□ 0.55
RPL38P63173 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.47■□□□□ 0.55
RPL38P63173 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.47■□□□□ 0.55
RPL38P63173 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.47■□□□□ 0.55
RPL38P63173 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.47■□□□□ 0.55
RPL38P63173 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
RPL38P63173 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.47■□□□□ 0.55
RPL38P63173 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.47■□□□□ 0.55
RPL38P63173 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RPL38P63173 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
RPL38P63173 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.47■□□□□ 0.55
RPL38P63173 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPL38P63173 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.47■□□□□ 0.55
RPL38P63173 IRX1P1-201ENST00000438849 1838 ntBASIC18.46■□□□□ 0.55
RPL38P63173 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RPL38P63173 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RPL38P63173 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.46■□□□□ 0.55
RPL38P63173 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.46■□□□□ 0.55
RPL38P63173 AC069152.1-201ENST00000438030 544 ntBASIC18.46■□□□□ 0.55
RPL38P63173 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RPL38P63173 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.46■□□□□ 0.55
RPL38P63173 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RPL38P63173 AC133041.1-202ENST00000642053 222 ntBASIC18.46■□□□□ 0.55
RPL38P63173 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.46■□□□□ 0.55
RPL38P63173 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RPL38P63173 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 FP475955.4-201ENST00000623131 1990 ntBASIC18.46■□□□□ 0.55
RPL38P63173 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.46■□□□□ 0.55
RPL38P63173 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL38P63173 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RPL38P63173 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
RPL38P63173 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.45■□□□□ 0.54
RPL38P63173 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
RPL38P63173 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RPL38P63173 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.45■□□□□ 0.54
RPL38P63173 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RPL38P63173 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.45■□□□□ 0.54
RPL38P63173 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.45■□□□□ 0.54
RPL38P63173 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RPL38P63173 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RPL38P63173 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
RPL38P63173 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RPL38P63173 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.45■□□□□ 0.54
RPL38P63173 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.45■□□□□ 0.54
RPL38P63173 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.45■□□□□ 0.54
RPL38P63173 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RPL38P63173 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RPL38P63173 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RPL38P63173 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.45■□□□□ 0.54
RPL38P63173 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RPL38P63173 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RPL38P63173 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.45■□□□□ 0.54
RPL38P63173 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL38P63173 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.45■□□□□ 0.54
RPL38P63173 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms