Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN20P56880 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN20P56880 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN20P56880 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN20P56880 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN20P56880 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN20P56880 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLDN20P56880 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLDN20P56880 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CLDN20P56880 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLDN20P56880 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN20P56880 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.59■□□□□ 0.41
CLDN20P56880 C1QL1P1-201ENST00000568105 661 ntBASIC17.59■□□□□ 0.41
CLDN20P56880 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CLDN20P56880 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN20P56880 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN20P56880 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CLDN20P56880 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN20P56880 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.58■□□□□ 0.41
CLDN20P56880 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN20P56880 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CLDN20P56880 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN20P56880 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CLDN20P56880 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLDN20P56880 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CLDN20P56880 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.58■□□□□ 0.4
CLDN20P56880 SNORA78-201ENST00000459373 127 ntBASIC17.58■□□□□ 0.4
CLDN20P56880 AP002982.1-201ENST00000492365 877 ntBASIC17.58■□□□□ 0.4
CLDN20P56880 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN20P56880 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLDN20P56880 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN20P56880 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN20P56880 AC113410.3-201ENST00000623366 203 ntBASIC17.58■□□□□ 0.4
CLDN20P56880 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CLDN20P56880 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CLDN20P56880 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN20P56880 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN20P56880 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN20P56880 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN20P56880 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN20P56880 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN20P56880 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN20P56880 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CLDN20P56880 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLDN20P56880 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CLDN20P56880 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN20P56880 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN20P56880 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN20P56880 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDN20P56880 AL353807.1-201ENST00000427475 662 ntBASIC17.57■□□□□ 0.4
CLDN20P56880 TSPY7P-201ENST00000431358 1114 ntBASIC17.57■□□□□ 0.4
CLDN20P56880 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDN20P56880 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN20P56880 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.57■□□□□ 0.4
CLDN20P56880 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 AP001412.1-201ENST00000608405 714 ntBASIC17.57■□□□□ 0.4
CLDN20P56880 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN20P56880 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN20P56880 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDN20P56880 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN20P56880 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN20P56880 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN20P56880 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN20P56880 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN20P56880 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN20P56880 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
CLDN20P56880 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN20P56880 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLDN20P56880 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN20P56880 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms