Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH11P55287 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH11P55287 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH11P55287 AC142381.4-202ENST00000563973 229 ntBASIC17.56■□□□□ 0.4
CDH11P55287 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH11P55287 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH11P55287 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH11P55287 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDH11P55287 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH11P55287 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH11P55287 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH11P55287 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH11P55287 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.55■□□□□ 0.4
CDH11P55287 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH11P55287 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH11P55287 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH11P55287 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 UNC93B4-201ENST00000505679 747 ntBASIC17.55■□□□□ 0.4
CDH11P55287 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.55■□□□□ 0.4
CDH11P55287 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.55■□□□□ 0.4
CDH11P55287 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.55■□□□□ 0.4
CDH11P55287 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH11P55287 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH11P55287 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH11P55287 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.55■□□□□ 0.4
CDH11P55287 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH11P55287 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDH11P55287 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH11P55287 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDH11P55287 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH11P55287 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH11P55287 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH11P55287 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CDH11P55287 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH11P55287 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH11P55287 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.54■□□□□ 0.4
CDH11P55287 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH11P55287 AC023632.3-201ENST00000521633 145 ntBASIC17.54■□□□□ 0.4
CDH11P55287 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDH11P55287 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CDH11P55287 AC008403.3-201ENST00000598924 454 ntBASIC17.54■□□□□ 0.4
CDH11P55287 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH11P55287 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH11P55287 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CDH11P55287 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH11P55287 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH11P55287 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDH11P55287 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH11P55287 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH11P55287 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
CDH11P55287 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH11P55287 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms