Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.15■□□□□ 0.5
NR1H2P55055 MIR4651-201ENST00000582622 73 ntBASIC18.15■□□□□ 0.5
NR1H2P55055 AC092118.2-201ENST00000613495 667 ntBASIC18.15■□□□□ 0.5
NR1H2P55055 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
NR1H2P55055 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.15■□□□□ 0.5
NR1H2P55055 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.15■□□□□ 0.5
NR1H2P55055 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NR1H2P55055 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
NR1H2P55055 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H2P55055 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H2P55055 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H2P55055 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H2P55055 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NR1H2P55055 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.14■□□□□ 0.49
NR1H2P55055 FAM201B-201ENST00000458407 597 ntBASIC18.14■□□□□ 0.49
NR1H2P55055 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.14■□□□□ 0.49
NR1H2P55055 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.14■□□□□ 0.49
NR1H2P55055 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.14■□□□□ 0.49
NR1H2P55055 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.14■□□□□ 0.49
NR1H2P55055 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.14■□□□□ 0.49
NR1H2P55055 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.14■□□□□ 0.49
NR1H2P55055 AC016405.3-201ENST00000607710 860 ntBASIC18.14■□□□□ 0.49
NR1H2P55055 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
NR1H2P55055 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.14■□□□□ 0.49
NR1H2P55055 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.14■□□□□ 0.49
NR1H2P55055 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H2P55055 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H2P55055 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H2P55055 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NR1H2P55055 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NR1H2P55055 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NR1H2P55055 AC012313.1-201ENST00000593393 3059 ntBASIC18.13■□□□□ 0.49
NR1H2P55055 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.13■□□□□ 0.49
NR1H2P55055 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.13■□□□□ 0.49
NR1H2P55055 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.13■□□□□ 0.49
NR1H2P55055 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.13■□□□□ 0.49
NR1H2P55055 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.13■□□□□ 0.49
NR1H2P55055 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.13■□□□□ 0.49
NR1H2P55055 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.13■□□□□ 0.49
NR1H2P55055 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.13■□□□□ 0.49
NR1H2P55055 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NR1H2P55055 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.13■□□□□ 0.49
NR1H2P55055 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
NR1H2P55055 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H2P55055 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.13■□□□□ 0.49
NR1H2P55055 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
NR1H2P55055 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.12■□□□□ 0.49
NR1H2P55055 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
NR1H2P55055 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NR1H2P55055 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.12■□□□□ 0.49
NR1H2P55055 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.12■□□□□ 0.49
NR1H2P55055 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.12■□□□□ 0.49
NR1H2P55055 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NR1H2P55055 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
NR1H2P55055 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NR1H2P55055 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.12■□□□□ 0.49
NR1H2P55055 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.12■□□□□ 0.49
NR1H2P55055 AC061975.6-201ENST00000579045 1553 ntBASIC18.12■□□□□ 0.49
NR1H2P55055 AC009237.14-201ENST00000609975 1594 ntBASIC18.12■□□□□ 0.49
NR1H2P55055 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NR1H2P55055 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.12■□□□□ 0.49
NR1H2P55055 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H2P55055 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.11■□□□□ 0.49
NR1H2P55055 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.11■□□□□ 0.49
NR1H2P55055 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms