Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LIMK2P53671 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.34■□□□□ 0.69
LIMK2P53671 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LIMK2P53671 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LIMK2P53671 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.34■□□□□ 0.69
LIMK2P53671 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.34■□□□□ 0.69
LIMK2P53671 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.34■□□□□ 0.69
LIMK2P53671 CROCCP3-202ENST00000420820 1947 ntBASIC19.34■□□□□ 0.69
LIMK2P53671 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
LIMK2P53671 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.34■□□□□ 0.69
LIMK2P53671 AC073912.3-201ENST00000624414 853 ntBASIC19.34■□□□□ 0.69
LIMK2P53671 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LIMK2P53671 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.34■□□□□ 0.69
LIMK2P53671 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
LIMK2P53671 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LIMK2P53671 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.33■□□□□ 0.69
LIMK2P53671 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LIMK2P53671 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LIMK2P53671 AL138781.2-201ENST00000617896 1843 ntBASIC19.33■□□□□ 0.69
LIMK2P53671 AC120498.9-201ENST00000339021 3867 ntBASIC19.33■□□□□ 0.69
LIMK2P53671 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.33■□□□□ 0.68
LIMK2P53671 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.33■□□□□ 0.68
LIMK2P53671 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.33■□□□□ 0.68
LIMK2P53671 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LIMK2P53671 AL121829.2-201ENST00000620908 328 ntBASIC19.33■□□□□ 0.68
LIMK2P53671 AL049637.2-201ENST00000641778 930 ntBASIC19.33■□□□□ 0.68
LIMK2P53671 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LIMK2P53671 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.33■□□□□ 0.68
LIMK2P53671 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LIMK2P53671 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.33■□□□□ 0.68
LIMK2P53671 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LIMK2P53671 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LIMK2P53671 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.32■□□□□ 0.68
LIMK2P53671 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.32■□□□□ 0.68
LIMK2P53671 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.32■□□□□ 0.68
LIMK2P53671 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
LIMK2P53671 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LIMK2P53671 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.32■□□□□ 0.68
LIMK2P53671 RARRES2P10-201ENST00000564312 460 ntBASIC19.32■□□□□ 0.68
LIMK2P53671 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.32■□□□□ 0.68
LIMK2P53671 AL121906.2-201ENST00000621597 723 ntBASIC19.32■□□□□ 0.68
LIMK2P53671 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.32■□□□□ 0.68
LIMK2P53671 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.32■□□□□ 0.68
LIMK2P53671 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.32■□□□□ 0.68
LIMK2P53671 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.32■□□□□ 0.68
LIMK2P53671 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.32■□□□□ 0.68
LIMK2P53671 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LIMK2P53671 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
LIMK2P53671 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LIMK2P53671 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.32■□□□□ 0.68
LIMK2P53671 AC104417.2-201ENST00000562989 1793 ntBASIC19.32■□□□□ 0.68
LIMK2P53671 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LIMK2P53671 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
LIMK2P53671 KRT17P2-201ENST00000300992 1314 ntBASIC19.31■□□□□ 0.68
LIMK2P53671 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.31■□□□□ 0.68
LIMK2P53671 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LIMK2P53671 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.31■□□□□ 0.68
LIMK2P53671 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 YBX1P10-201ENST00000444752 975 ntBASIC19.31■□□□□ 0.68
LIMK2P53671 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.31■□□□□ 0.68
LIMK2P53671 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
LIMK2P53671 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.31■□□□□ 0.68
LIMK2P53671 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LIMK2P53671 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms