Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC1P51610 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.74■□□□□ 0.27
HCFC1P51610 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.74■□□□□ 0.27
HCFC1P51610 NPAP1P7-201ENST00000613027 823 ntBASIC16.74■□□□□ 0.27
HCFC1P51610 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.74■□□□□ 0.27
HCFC1P51610 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
HCFC1P51610 PCDHAC2-203ENST00000615316 3011 ntBASIC16.74■□□□□ 0.27
HCFC1P51610 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.74■□□□□ 0.27
HCFC1P51610 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HCFC1P51610 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HCFC1P51610 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.74■□□□□ 0.27
HCFC1P51610 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.74■□□□□ 0.27
HCFC1P51610 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.74■□□□□ 0.27
HCFC1P51610 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.74■□□□□ 0.27
HCFC1P51610 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.74■□□□□ 0.27
HCFC1P51610 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.74■□□□□ 0.27
HCFC1P51610 AC140113.3-201ENST00000605663 199 ntBASIC16.74■□□□□ 0.27
HCFC1P51610 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HCFC1P51610 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.74■□□□□ 0.27
HCFC1P51610 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCFC1P51610 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.73■□□□□ 0.27
HCFC1P51610 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.73■□□□□ 0.27
HCFC1P51610 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HCFC1P51610 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
HCFC1P51610 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HCFC1P51610 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HCFC1P51610 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
HCFC1P51610 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.73■□□□□ 0.27
HCFC1P51610 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HCFC1P51610 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.73■□□□□ 0.27
HCFC1P51610 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCFC1P51610 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 ATP5G2P1-201ENST00000433580 426 ntBASIC16.72■□□□□ 0.27
HCFC1P51610 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.72■□□□□ 0.27
HCFC1P51610 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HCFC1P51610 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.72■□□□□ 0.27
HCFC1P51610 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HCFC1P51610 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.72■□□□□ 0.27
HCFC1P51610 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 AC036111.1-201ENST00000533973 1582 ntBASIC16.72■□□□□ 0.27
HCFC1P51610 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HCFC1P51610 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HCFC1P51610 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HCFC1P51610 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.72■□□□□ 0.27
HCFC1P51610 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
HCFC1P51610 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.72■□□□□ 0.27
HCFC1P51610 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.72■□□□□ 0.27
HCFC1P51610 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC1P51610 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HCFC1P51610 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC1P51610 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC1P51610 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC1P51610 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HCFC1P51610 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC1P51610 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HCFC1P51610 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.71■□□□□ 0.27
HCFC1P51610 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.71■□□□□ 0.27
HCFC1P51610 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HCFC1P51610 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.71■□□□□ 0.27
HCFC1P51610 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.71■□□□□ 0.27
HCFC1P51610 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms