Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CDC34P49427 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC34P49427 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CDC34P49427 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.17■□□□□ 0.02
CDC34P49427 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.17■□□□□ 0.02
CDC34P49427 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC34P49427 AC096631.2-201ENST00000436136 790 ntBASIC15.17■□□□□ 0.02
CDC34P49427 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC34P49427 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC34P49427 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.17■□□□□ 0.02
CDC34P49427 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.17■□□□□ 0.02
CDC34P49427 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CDC34P49427 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.17■□□□□ 0.02
CDC34P49427 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.17■□□□□ 0.02
CDC34P49427 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDC34P49427 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDC34P49427 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.16■□□□□ 0.02
CDC34P49427 AL512353.2-201ENST00000448759 1962 ntBASIC15.16■□□□□ 0.02
CDC34P49427 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDC34P49427 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC34P49427 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.16■□□□□ 0.02
CDC34P49427 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.16■□□□□ 0.02
CDC34P49427 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.16■□□□□ 0.02
CDC34P49427 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC34P49427 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDC34P49427 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CDC34P49427 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC34P49427 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDC34P49427 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.15■□□□□ 0.02
CDC34P49427 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDC34P49427 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.15■□□□□ 0.02
CDC34P49427 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDC34P49427 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDC34P49427 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.15■□□□□ 0.02
CDC34P49427 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.15■□□□□ 0.02
CDC34P49427 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.15■□□□□ 0.02
CDC34P49427 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDC34P49427 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDC34P49427 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CDC34P49427 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDC34P49427 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms