Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.86■□□□□ 0.29
CX3CR1P49238 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.86■□□□□ 0.29
CX3CR1P49238 PRKY-204ENST00000533551 1019 ntBASIC16.86■□□□□ 0.29
CX3CR1P49238 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CX3CR1P49238 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CR1P49238 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CR1P49238 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CR1P49238 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CR1P49238 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CR1P49238 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CR1P49238 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CR1P49238 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CX3CR1P49238 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CR1P49238 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CR1P49238 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CR1P49238 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CX3CR1P49238 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CR1P49238 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CX3CR1P49238 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CR1P49238 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.85■□□□□ 0.29
CX3CR1P49238 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.85■□□□□ 0.29
CX3CR1P49238 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.85■□□□□ 0.29
CX3CR1P49238 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CX3CR1P49238 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CR1P49238 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.85■□□□□ 0.29
CX3CR1P49238 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CX3CR1P49238 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CR1P49238 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CX3CR1P49238 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CR1P49238 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CR1P49238 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CR1P49238 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.85■□□□□ 0.29
CX3CR1P49238 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CR1P49238 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.85■□□□□ 0.29
CX3CR1P49238 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CR1P49238 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.85■□□□□ 0.29
CX3CR1P49238 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.85■□□□□ 0.29
CX3CR1P49238 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CR1P49238 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CX3CR1P49238 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CX3CR1P49238 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CX3CR1P49238 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.85■□□□□ 0.29
CX3CR1P49238 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CR1P49238 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.84■□□□□ 0.29
CX3CR1P49238 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CX3CR1P49238 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CX3CR1P49238 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.84■□□□□ 0.29
CX3CR1P49238 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.84■□□□□ 0.29
CX3CR1P49238 RNA5SP413-201ENST00000516373 109 ntBASIC16.84■□□□□ 0.29
CX3CR1P49238 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.84■□□□□ 0.29
CX3CR1P49238 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.84■□□□□ 0.29
CX3CR1P49238 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CX3CR1P49238 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.84■□□□□ 0.29
CX3CR1P49238 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.84■□□□□ 0.29
CX3CR1P49238 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.84■□□□□ 0.29
CX3CR1P49238 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CR1P49238 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CX3CR1P49238 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.83■□□□□ 0.29
CX3CR1P49238 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CX3CR1P49238 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CX3CR1P49238 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CX3CR1P49238 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CX3CR1P49238 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 ID1-201ENST00000376105 1233 ntBASIC16.83■□□□□ 0.28
CX3CR1P49238 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.83■□□□□ 0.28
CX3CR1P49238 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.83■□□□□ 0.28
CX3CR1P49238 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.83■□□□□ 0.28
CX3CR1P49238 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 AL049812.1-201ENST00000432563 2267 ntBASIC16.83■□□□□ 0.28
CX3CR1P49238 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CX3CR1P49238 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CX3CR1P49238 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.83■□□□□ 0.28
CX3CR1P49238 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CX3CR1P49238 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CR1P49238 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms