Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1DP48730 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CSNK1DP48730 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1DP48730 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CSNK1DP48730 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.27■□□□□ 0.68
CSNK1DP48730 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1DP48730 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.27■□□□□ 0.68
CSNK1DP48730 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1DP48730 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1DP48730 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CSNK1DP48730 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1DP48730 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1DP48730 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1DP48730 AC012306.2-201ENST00000609350 630 ntBASIC19.27■□□□□ 0.68
CSNK1DP48730 AC097493.4-201ENST00000641197 219 ntBASIC19.27■□□□□ 0.68
CSNK1DP48730 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.27■□□□□ 0.68
CSNK1DP48730 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1DP48730 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1DP48730 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CSNK1DP48730 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSNK1DP48730 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSNK1DP48730 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSNK1DP48730 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
CSNK1DP48730 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.26■□□□□ 0.67
CSNK1DP48730 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 FEM1AP3-201ENST00000403722 1741 ntBASIC19.26■□□□□ 0.67
CSNK1DP48730 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CSNK1DP48730 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 AC005332.7-201ENST00000614046 2005 ntBASIC19.26■□□□□ 0.67
CSNK1DP48730 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
CSNK1DP48730 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CSNK1DP48730 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.26■□□□□ 0.67
CSNK1DP48730 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.26■□□□□ 0.67
CSNK1DP48730 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.26■□□□□ 0.67
CSNK1DP48730 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CSNK1DP48730 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CSNK1DP48730 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1DP48730 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.25■□□□□ 0.67
CSNK1DP48730 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.25■□□□□ 0.67
CSNK1DP48730 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1DP48730 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CSNK1DP48730 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1DP48730 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1DP48730 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1DP48730 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1DP48730 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1DP48730 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1DP48730 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.25■□□□□ 0.67
CSNK1DP48730 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1DP48730 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.25■□□□□ 0.67
CSNK1DP48730 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1DP48730 AL023803.3-201ENST00000615559 522 ntBASIC19.25■□□□□ 0.67
CSNK1DP48730 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1DP48730 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.25■□□□□ 0.67
CSNK1DP48730 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1DP48730 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1DP48730 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1DP48730 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1DP48730 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CSNK1DP48730 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CSNK1DP48730 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1DP48730 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1DP48730 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1DP48730 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1DP48730 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1DP48730 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1DP48730 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CSNK1DP48730 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1DP48730 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1DP48730 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1DP48730 AC211429.1-201ENST00000415277 523 ntBASIC19.24■□□□□ 0.67
CSNK1DP48730 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CSNK1DP48730 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.24■□□□□ 0.67
CSNK1DP48730 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1DP48730 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1DP48730 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1DP48730 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1DP48730 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1DP48730 AC145285.6-201ENST00000604632 637 ntBASIC19.24■□□□□ 0.67
CSNK1DP48730 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CSNK1DP48730 FP475955.4-201ENST00000623131 1990 ntBASIC19.24■□□□□ 0.67
CSNK1DP48730 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1DP48730 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1DP48730 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1DP48730 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1DP48730 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms