Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP13P45452 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.95■□□□□ 0.78
MMP13P45452 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MMP13P45452 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.95■□□□□ 0.78
MMP13P45452 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.95■□□□□ 0.78
MMP13P45452 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP13P45452 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP13P45452 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.95■□□□□ 0.78
MMP13P45452 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MMP13P45452 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
MMP13P45452 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
MMP13P45452 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
MMP13P45452 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.95■□□□□ 0.78
MMP13P45452 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MMP13P45452 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP13P45452 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP13P45452 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 AC079598.2-202ENST00000546624 1451 ntBASIC19.94■□□□□ 0.78
MMP13P45452 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
MMP13P45452 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
MMP13P45452 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.94■□□□□ 0.78
MMP13P45452 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.94■□□□□ 0.78
MMP13P45452 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
MMP13P45452 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.94■□□□□ 0.78
MMP13P45452 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.94■□□□□ 0.78
MMP13P45452 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
MMP13P45452 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
MMP13P45452 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
MMP13P45452 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP13P45452 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP13P45452 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP13P45452 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP13P45452 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MMP13P45452 AC005332.8-201ENST00000622750 2735 ntBASIC19.93■□□□□ 0.78
MMP13P45452 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.93■□□□□ 0.78
MMP13P45452 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP13P45452 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP13P45452 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MMP13P45452 KRASP1-201ENST00000407852 552 ntBASIC19.93■□□□□ 0.78
MMP13P45452 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MMP13P45452 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.93■□□□□ 0.78
MMP13P45452 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.93■□□□□ 0.78
MMP13P45452 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
MMP13P45452 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.93■□□□□ 0.78
MMP13P45452 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
MMP13P45452 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.93■□□□□ 0.78
MMP13P45452 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP13P45452 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
MMP13P45452 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
MMP13P45452 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
MMP13P45452 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
MMP13P45452 AC009113.1-201ENST00000570267 2443 ntBASIC19.93■□□□□ 0.78
MMP13P45452 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP13P45452 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
MMP13P45452 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
MMP13P45452 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.92■□□□□ 0.78
MMP13P45452 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.92■□□□□ 0.78
MMP13P45452 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.92■□□□□ 0.78
MMP13P45452 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.92■□□□□ 0.78
MMP13P45452 C1QBPP2-201ENST00000528754 825 ntBASIC19.92■□□□□ 0.78
MMP13P45452 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
MMP13P45452 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.92■□□□□ 0.78
MMP13P45452 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.92■□□□□ 0.78
MMP13P45452 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.92■□□□□ 0.78
MMP13P45452 AC124016.1-201ENST00000609552 612 ntBASIC19.92■□□□□ 0.78
MMP13P45452 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
MMP13P45452 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.92■□□□□ 0.78
MMP13P45452 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
MMP13P45452 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP13P45452 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MMP13P45452 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
MMP13P45452 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.92■□□□□ 0.78
MMP13P45452 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MMP13P45452 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP13P45452 AC104581.1-202ENST00000635932 2618 ntBASIC19.91■□□□□ 0.78
MMP13P45452 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms