Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CTSKP43235 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.1■□□□□ 0.65
CTSKP43235 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CTSKP43235 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CTSKP43235 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.1■□□□□ 0.65
CTSKP43235 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.1■□□□□ 0.65
CTSKP43235 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.1■□□□□ 0.65
CTSKP43235 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.1■□□□□ 0.65
CTSKP43235 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.1■□□□□ 0.65
CTSKP43235 AL358472.4-201ENST00000633140 710 ntBASIC19.1■□□□□ 0.65
CTSKP43235 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.1■□□□□ 0.65
CTSKP43235 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.1■□□□□ 0.65
CTSKP43235 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.1■□□□□ 0.65
CTSKP43235 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSKP43235 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.09■□□□□ 0.65
CTSKP43235 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTSKP43235 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTSKP43235 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CTSKP43235 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTSKP43235 TSPY5P-201ENST00000426936 936 ntBASIC19.09■□□□□ 0.65
CTSKP43235 TSPY17P-201ENST00000450329 467 ntBASIC19.09■□□□□ 0.65
CTSKP43235 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.09■□□□□ 0.65
CTSKP43235 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.09■□□□□ 0.65
CTSKP43235 COX11P1-201ENST00000489116 835 ntBASIC19.09■□□□□ 0.65
CTSKP43235 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTSKP43235 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.09■□□□□ 0.65
CTSKP43235 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTSKP43235 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.09■□□□□ 0.65
CTSKP43235 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
CTSKP43235 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CTSKP43235 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTSKP43235 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTSKP43235 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTSKP43235 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTSKP43235 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTSKP43235 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTSKP43235 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTSKP43235 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.08■□□□□ 0.65
CTSKP43235 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTSKP43235 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTSKP43235 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.08■□□□□ 0.65
CTSKP43235 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.08■□□□□ 0.65
CTSKP43235 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTSKP43235 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTSKP43235 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.08■□□□□ 0.64
CTSKP43235 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CTSKP43235 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.08■□□□□ 0.64
CTSKP43235 AL031133.1-201ENST00000406807 723 ntBASIC19.08■□□□□ 0.64
CTSKP43235 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.08■□□□□ 0.64
CTSKP43235 UPK3BP1-201ENST00000428678 509 ntBASIC19.08■□□□□ 0.64
CTSKP43235 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTSKP43235 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CTSKP43235 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTSKP43235 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.08■□□□□ 0.64
CTSKP43235 AL160286.2-201ENST00000567150 934 ntBASIC19.08■□□□□ 0.64
CTSKP43235 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.08■□□□□ 0.64
CTSKP43235 AC141257.4-201ENST00000634557 245 ntBASIC19.08■□□□□ 0.64
CTSKP43235 AC136944.6-201ENST00000634818 245 ntBASIC19.08■□□□□ 0.64
CTSKP43235 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.08■□□□□ 0.64
CTSKP43235 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTSKP43235 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTSKP43235 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTSKP43235 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTSKP43235 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CTSKP43235 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTSKP43235 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.08■□□□□ 0.64
CTSKP43235 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTSKP43235 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.08■□□□□ 0.64
CTSKP43235 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CTSKP43235 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.08■□□□□ 0.64
CTSKP43235 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CTSKP43235 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTSKP43235 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CTSKP43235 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CTSKP43235 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.07■□□□□ 0.64
CTSKP43235 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.07■□□□□ 0.64
CTSKP43235 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.07■□□□□ 0.64
CTSKP43235 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CTSKP43235 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSKP43235 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms