Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 ESPNP-201ENST00000270691 2015 ntBASIC21.79■■□□□ 1.08
CLCN1P35523 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCN1P35523 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCN1P35523 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCN1P35523 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCN1P35523 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CLCN1P35523 AC008764.6-201ENST00000595909 2069 ntBASIC21.79■■□□□ 1.08
CLCN1P35523 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.79■■□□□ 1.08
CLCN1P35523 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CLCN1P35523 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.79■■□□□ 1.08
CLCN1P35523 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCN1P35523 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CLCN1P35523 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
CLCN1P35523 ABALON-201ENST00000629058 1903 ntBASIC21.78■■□□□ 1.08
CLCN1P35523 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CLCN1P35523 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 AC092437.1-201ENST00000624794 1048 ntBASIC21.78■■□□□ 1.08
CLCN1P35523 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLCN1P35523 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 Z98044.1-201ENST00000632503 1764 ntBASIC21.78■■□□□ 1.08
CLCN1P35523 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLCN1P35523 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN1P35523 AC093525.10-201ENST00000625130 1569 ntBASIC21.78■■□□□ 1.08
CLCN1P35523 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CLCN1P35523 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CLCN1P35523 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN1P35523 LINC00896-202ENST00000609602 2128 ntBASIC21.77■■□□□ 1.08
CLCN1P35523 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN1P35523 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CLCN1P35523 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN1P35523 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN1P35523 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN1P35523 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.77■■□□□ 1.08
CLCN1P35523 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN1P35523 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CLCN1P35523 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN1P35523 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
CLCN1P35523 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN1P35523 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
CLCN1P35523 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CLCN1P35523 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN1P35523 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN1P35523 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.77■■□□□ 1.08
CLCN1P35523 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN1P35523 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.77■■□□□ 1.08
CLCN1P35523 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CLCN1P35523 BID-214ENST00000617586 542 ntTSL 5 BASIC21.77■■□□□ 1.08
CLCN1P35523 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CLCN1P35523 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CLCN1P35523 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
CLCN1P35523 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CLCN1P35523 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CLCN1P35523 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLCN1P35523 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLCN1P35523 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLCN1P35523 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN1P35523 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CLCN1P35523 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CLCN1P35523 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CLCN1P35523 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CLCN1P35523 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN1P35523 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.76■■□□□ 1.07
CLCN1P35523 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CLCN1P35523 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CLCN1P35523 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN1P35523 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.76■■□□□ 1.07
CLCN1P35523 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.76■■□□□ 1.07
CLCN1P35523 IKBKGP1-201ENST00000612193 1073 ntBASIC21.76■■□□□ 1.07
CLCN1P35523 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.76■■□□□ 1.07
CLCN1P35523 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN1P35523 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.76■■□□□ 1.07
CLCN1P35523 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms