Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
RFC4P35249 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC24.14■■□□□ 1.45
RFC4P35249 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RFC4P35249 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC24.14■■□□□ 1.45
RFC4P35249 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
RFC4P35249 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC24.14■■□□□ 1.45
RFC4P35249 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
RFC4P35249 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC24.14■■□□□ 1.45
RFC4P35249 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RFC4P35249 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RFC4P35249 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
RFC4P35249 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RFC4P35249 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC24.13■■□□□ 1.45
RFC4P35249 AL691432.2-201ENST00000607222 2038 ntBASIC24.13■■□□□ 1.45
RFC4P35249 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
RFC4P35249 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RFC4P35249 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RFC4P35249 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RFC4P35249 NUS1P1-201ENST00000446295 882 ntBASIC24.13■■□□□ 1.45
RFC4P35249 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC24.13■■□□□ 1.45
RFC4P35249 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC24.13■■□□□ 1.45
RFC4P35249 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.13■■□□□ 1.45
RFC4P35249 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
RFC4P35249 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.13■■□□□ 1.45
RFC4P35249 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RFC4P35249 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RFC4P35249 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RFC4P35249 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RFC4P35249 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.13■■□□□ 1.45
RFC4P35249 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RFC4P35249 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RFC4P35249 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.13■■□□□ 1.45
RFC4P35249 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
RFC4P35249 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
RFC4P35249 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC24.12■■□□□ 1.45
RFC4P35249 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RFC4P35249 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RFC4P35249 AC020907.5-201ENST00000624372 1936 ntBASIC24.12■■□□□ 1.45
RFC4P35249 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.12■■□□□ 1.45
RFC4P35249 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC24.12■■□□□ 1.45
RFC4P35249 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RFC4P35249 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RFC4P35249 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RFC4P35249 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RFC4P35249 KRT8P26-201ENST00000534154 1276 ntBASIC24.12■■□□□ 1.45
RFC4P35249 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC24.12■■□□□ 1.45
RFC4P35249 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
RFC4P35249 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RFC4P35249 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RFC4P35249 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.12■■□□□ 1.45
RFC4P35249 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RFC4P35249 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RFC4P35249 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RFC4P35249 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RFC4P35249 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24.11■■□□□ 1.45
RFC4P35249 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
RFC4P35249 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.11■■□□□ 1.45
RFC4P35249 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
RFC4P35249 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RFC4P35249 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RFC4P35249 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.11■■□□□ 1.45
RFC4P35249 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC24.11■■□□□ 1.45
RFC4P35249 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.11■■□□□ 1.45
RFC4P35249 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
RFC4P35249 IL11-204ENST00000590625 1028 ntTSL 2 BASIC24.11■■□□□ 1.45
RFC4P35249 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RFC4P35249 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
RFC4P35249 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RFC4P35249 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RFC4P35249 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RFC4P35249 GPAT2P1-201ENST00000444924 1672 ntBASIC24.11■■□□□ 1.45
RFC4P35249 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RFC4P35249 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.11■■□□□ 1.45
RFC4P35249 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RFC4P35249 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC24.1■■□□□ 1.45
RFC4P35249 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
RFC4P35249 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RFC4P35249 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.1■■□□□ 1.45
RFC4P35249 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RFC4P35249 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RFC4P35249 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RFC4P35249 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC24.1■■□□□ 1.45
RFC4P35249 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
RFC4P35249 IFNL4P1-201ENST00000607083 540 ntBASIC24.1■■□□□ 1.45
RFC4P35249 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
RFC4P35249 AL162741.1-201ENST00000565563 1558 ntBASIC24.1■■□□□ 1.45
RFC4P35249 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
RFC4P35249 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.1■■□□□ 1.45
RFC4P35249 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24.1■■□□□ 1.45
RFC4P35249 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RFC4P35249 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
RFC4P35249 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC24.1■■□□□ 1.45
RFC4P35249 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RFC4P35249 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RFC4P35249 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC24.09■■□□□ 1.45
RFC4P35249 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RFC4P35249 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RFC4P35249 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RFC4P35249 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
RFC4P35249 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms