Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC097488.1-201ENST00000507834 756 ntBASIC19.89■□□□□ 0.77
HOXC13P31276 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.89■□□□□ 0.77
HOXC13P31276 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC13P31276 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC13P31276 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC13P31276 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC13P31276 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC13P31276 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC13P31276 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC13P31276 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC13P31276 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC13P31276 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC13P31276 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXC13P31276 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 FSCN1P1-201ENST00000568912 1481 ntBASIC19.88■□□□□ 0.77
HOXC13P31276 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC13P31276 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC13P31276 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXC13P31276 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 AK4P3-201ENST00000418260 669 ntBASIC19.88■□□□□ 0.77
HOXC13P31276 UPK3BP1-201ENST00000428678 509 ntBASIC19.88■□□□□ 0.77
HOXC13P31276 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC13P31276 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
HOXC13P31276 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXC13P31276 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXC13P31276 AC026271.3-201ENST00000571884 352 ntBASIC19.88■□□□□ 0.77
HOXC13P31276 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
HOXC13P31276 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC13P31276 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HOXC13P31276 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC13P31276 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HOXC13P31276 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC13P31276 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC13P31276 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXC13P31276 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HOXC13P31276 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC13P31276 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXC13P31276 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXC13P31276 TSPY14P-201ENST00000303979 915 ntBASIC19.87■□□□□ 0.77
HOXC13P31276 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXC13P31276 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC13P31276 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC13P31276 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.87■□□□□ 0.77
HOXC13P31276 EGLN1P1-201ENST00000531623 762 ntBASIC19.87■□□□□ 0.77
HOXC13P31276 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.87■□□□□ 0.77
HOXC13P31276 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
HOXC13P31276 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
HOXC13P31276 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXC13P31276 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC13P31276 AC005332.7-201ENST00000614046 2005 ntBASIC19.86■□□□□ 0.77
HOXC13P31276 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
HOXC13P31276 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC13P31276 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC13P31276 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HOXC13P31276 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.86■□□□□ 0.77
HOXC13P31276 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HOXC13P31276 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXC13P31276 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC13P31276 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
HOXC13P31276 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC13P31276 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC13P31276 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HOXC13P31276 AC022616.7-201ENST00000525383 220 ntBASIC19.86■□□□□ 0.77
HOXC13P31276 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXC13P31276 AP005242.2-201ENST00000580065 1175 ntBASIC19.86■□□□□ 0.77
HOXC13P31276 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXC13P31276 AC139887.4-201ENST00000607877 719 ntBASIC19.86■□□□□ 0.77
HOXC13P31276 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HOXC13P31276 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC13P31276 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC13P31276 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC13P31276 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC13P31276 KRT8P41-201ENST00000533985 1514 ntBASIC19.86■□□□□ 0.77
HOXC13P31276 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXC13P31276 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC13P31276 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HOXC13P31276 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HOXC13P31276 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC13P31276 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC13P31276 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC13P31276 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXC13P31276 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXC13P31276 AC116562.4-201ENST00000641316 2276 ntBASIC19.85■□□□□ 0.77
HOXC13P31276 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC13P31276 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
HOXC13P31276 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC13P31276 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC13P31276 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.85■□□□□ 0.77
HOXC13P31276 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms