Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NFKB1P19838 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NFKB1P19838 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NFKB1P19838 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NFKB1P19838 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.52■□□□□ 0.72
NFKB1P19838 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NFKB1P19838 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NFKB1P19838 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.52■□□□□ 0.72
NFKB1P19838 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.52■□□□□ 0.72
NFKB1P19838 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.52■□□□□ 0.72
NFKB1P19838 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.52■□□□□ 0.72
NFKB1P19838 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NFKB1P19838 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.52■□□□□ 0.72
NFKB1P19838 IRX1P1-201ENST00000438849 1838 ntBASIC19.52■□□□□ 0.72
NFKB1P19838 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NFKB1P19838 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NFKB1P19838 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.52■□□□□ 0.71
NFKB1P19838 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
NFKB1P19838 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NFKB1P19838 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NFKB1P19838 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.51■□□□□ 0.71
NFKB1P19838 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 NIFKP9-201ENST00000419265 221 ntBASIC19.51■□□□□ 0.71
NFKB1P19838 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 AP002982.1-201ENST00000492365 877 ntBASIC19.51■□□□□ 0.71
NFKB1P19838 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.51■□□□□ 0.71
NFKB1P19838 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.51■□□□□ 0.71
NFKB1P19838 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.51■□□□□ 0.71
NFKB1P19838 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
NFKB1P19838 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NFKB1P19838 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.51■□□□□ 0.71
NFKB1P19838 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NFKB1P19838 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.5■□□□□ 0.71
NFKB1P19838 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.5■□□□□ 0.71
NFKB1P19838 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NFKB1P19838 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.5■□□□□ 0.71
NFKB1P19838 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.5■□□□□ 0.71
NFKB1P19838 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.5■□□□□ 0.71
NFKB1P19838 AC098590.1-201ENST00000468126 897 ntBASIC19.5■□□□□ 0.71
NFKB1P19838 RPS2P4-201ENST00000476944 856 ntBASIC19.5■□□□□ 0.71
NFKB1P19838 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NFKB1P19838 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.5■□□□□ 0.71
NFKB1P19838 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.5■□□□□ 0.71
NFKB1P19838 AL445675.2-201ENST00000620291 557 ntBASIC19.5■□□□□ 0.71
NFKB1P19838 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.5■□□□□ 0.71
NFKB1P19838 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.5■□□□□ 0.71
NFKB1P19838 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFKB1P19838 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.5■□□□□ 0.71
NFKB1P19838 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NFKB1P19838 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NFKB1P19838 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.49■□□□□ 0.71
NFKB1P19838 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NFKB1P19838 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.49■□□□□ 0.71
NFKB1P19838 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
NFKB1P19838 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 ABHD17AP1-201ENST00000358206 933 ntBASIC19.49■□□□□ 0.71
NFKB1P19838 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
NFKB1P19838 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.49■□□□□ 0.71
NFKB1P19838 Z85996.1-201ENST00000494644 937 ntBASIC19.49■□□□□ 0.71
NFKB1P19838 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
NFKB1P19838 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.49■□□□□ 0.71
NFKB1P19838 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.49■□□□□ 0.71
NFKB1P19838 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 KRT8P41-201ENST00000533985 1514 ntBASIC19.49■□□□□ 0.71
NFKB1P19838 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKB1P19838 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms