Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.28■□□□□ 0.68
VCLP18206 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.28■□□□□ 0.68
VCLP18206 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.28■□□□□ 0.68
VCLP18206 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VCLP18206 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VCLP18206 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.28■□□□□ 0.68
VCLP18206 TUBB8P6-201ENST00000436895 1288 ntBASIC19.28■□□□□ 0.68
VCLP18206 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.28■□□□□ 0.68
VCLP18206 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.28■□□□□ 0.68
VCLP18206 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.28■□□□□ 0.68
VCLP18206 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.28■□□□□ 0.68
VCLP18206 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
VCLP18206 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VCLP18206 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCLP18206 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.27■□□□□ 0.68
VCLP18206 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.27■□□□□ 0.68
VCLP18206 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.27■□□□□ 0.68
VCLP18206 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
VCLP18206 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VCLP18206 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.27■□□□□ 0.68
VCLP18206 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VCLP18206 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.27■□□□□ 0.68
VCLP18206 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.27■□□□□ 0.68
VCLP18206 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.27■□□□□ 0.68
VCLP18206 AC093503.3-201ENST00000624917 2352 ntBASIC19.27■□□□□ 0.67
VCLP18206 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
VCLP18206 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
VCLP18206 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 HTR7P1-201ENST00000538670 1336 ntBASIC19.26■□□□□ 0.67
VCLP18206 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.26■□□□□ 0.67
VCLP18206 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.26■□□□□ 0.67
VCLP18206 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.26■□□□□ 0.67
VCLP18206 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
VCLP18206 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.26■□□□□ 0.67
VCLP18206 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.26■□□□□ 0.67
VCLP18206 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
VCLP18206 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 RPS2P55-201ENST00000397318 883 ntBASIC19.26■□□□□ 0.67
VCLP18206 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 AP002982.1-201ENST00000492365 877 ntBASIC19.26■□□□□ 0.67
VCLP18206 AC107956.1-201ENST00000494359 873 ntBASIC19.26■□□□□ 0.67
VCLP18206 KRT18P16-201ENST00000510337 1294 ntBASIC19.26■□□□□ 0.67
VCLP18206 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.26■□□□□ 0.67
VCLP18206 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VCLP18206 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.26■□□□□ 0.67
VCLP18206 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.26■□□□□ 0.67
VCLP18206 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.26■□□□□ 0.67
VCLP18206 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.26■□□□□ 0.67
VCLP18206 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.26■□□□□ 0.67
VCLP18206 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
VCLP18206 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
VCLP18206 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCLP18206 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VCLP18206 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.25■□□□□ 0.67
VCLP18206 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.25■□□□□ 0.67
VCLP18206 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.25■□□□□ 0.67
VCLP18206 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.25■□□□□ 0.67
VCLP18206 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VCLP18206 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms