Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS1P17812 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS1P17812 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.31■□□□□ 0.68
CTPS1P17812 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CTPS1P17812 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.31■□□□□ 0.68
CTPS1P17812 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CTPS1P17812 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.3■□□□□ 0.68
CTPS1P17812 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CTPS1P17812 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.3■□□□□ 0.68
CTPS1P17812 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CTPS1P17812 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CTPS1P17812 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.3■□□□□ 0.68
CTPS1P17812 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.3■□□□□ 0.68
CTPS1P17812 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CTPS1P17812 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CTPS1P17812 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.3■□□□□ 0.68
CTPS1P17812 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.3■□□□□ 0.68
CTPS1P17812 AC130371.2-201ENST00000619443 611 ntBASIC19.3■□□□□ 0.68
CTPS1P17812 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CTPS1P17812 AL032819.2-201ENST00000624543 2162 ntBASIC19.3■□□□□ 0.68
CTPS1P17812 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS1P17812 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.3■□□□□ 0.68
CTPS1P17812 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CTPS1P17812 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS1P17812 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS1P17812 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.29■□□□□ 0.68
CTPS1P17812 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
CTPS1P17812 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS1P17812 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS1P17812 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS1P17812 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS1P17812 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.29■□□□□ 0.68
CTPS1P17812 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.29■□□□□ 0.68
CTPS1P17812 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CTPS1P17812 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS1P17812 RBM17P1-201ENST00000453646 1190 ntBASIC19.29■□□□□ 0.68
CTPS1P17812 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
CTPS1P17812 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.29■□□□□ 0.68
CTPS1P17812 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS1P17812 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.29■□□□□ 0.68
CTPS1P17812 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.29■□□□□ 0.68
CTPS1P17812 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CTPS1P17812 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS1P17812 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS1P17812 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.29■□□□□ 0.68
CTPS1P17812 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CTPS1P17812 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS1P17812 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.29■□□□□ 0.68
CTPS1P17812 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.29■□□□□ 0.68
CTPS1P17812 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS1P17812 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.28■□□□□ 0.68
CTPS1P17812 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.28■□□□□ 0.68
CTPS1P17812 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS1P17812 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CTPS1P17812 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS1P17812 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.28■□□□□ 0.68
CTPS1P17812 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CTPS1P17812 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.28■□□□□ 0.68
CTPS1P17812 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.28■□□□□ 0.68
CTPS1P17812 AP000525.1-201ENST00000608286 694 ntBASIC19.28■□□□□ 0.68
CTPS1P17812 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.28■□□□□ 0.68
CTPS1P17812 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.28■□□□□ 0.68
CTPS1P17812 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS1P17812 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS1P17812 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS1P17812 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS1P17812 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS1P17812 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS1P17812 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.28■□□□□ 0.68
CTPS1P17812 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS1P17812 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS1P17812 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CTPS1P17812 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.27■□□□□ 0.68
CTPS1P17812 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.27■□□□□ 0.68
CTPS1P17812 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.27■□□□□ 0.68
CTPS1P17812 TEX21P-204ENST00000641479 1693 ntBASIC19.27■□□□□ 0.68
CTPS1P17812 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CTPS1P17812 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.27■□□□□ 0.68
CTPS1P17812 FAM207BP-201ENST00000447172 505 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms