Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NCK1P16333 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.14■□□□□ 0.49
NCK1P16333 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NCK1P16333 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
NCK1P16333 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NCK1P16333 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NCK1P16333 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.13■□□□□ 0.49
NCK1P16333 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.13■□□□□ 0.49
NCK1P16333 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.13■□□□□ 0.49
NCK1P16333 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NCK1P16333 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.13■□□□□ 0.49
NCK1P16333 AC034268.1-201ENST00000441047 882 ntBASIC18.13■□□□□ 0.49
NCK1P16333 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.13■□□□□ 0.49
NCK1P16333 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
NCK1P16333 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NCK1P16333 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.13■□□□□ 0.49
NCK1P16333 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NCK1P16333 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCK1P16333 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 AC104417.2-201ENST00000562989 1793 ntBASIC18.12■□□□□ 0.49
NCK1P16333 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NCK1P16333 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
NCK1P16333 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NCK1P16333 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.12■□□□□ 0.49
NCK1P16333 AC093787.1-201ENST00000450396 207 ntBASIC18.12■□□□□ 0.49
NCK1P16333 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.12■□□□□ 0.49
NCK1P16333 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.12■□□□□ 0.49
NCK1P16333 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.12■□□□□ 0.49
NCK1P16333 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.12■□□□□ 0.49
NCK1P16333 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.12■□□□□ 0.49
NCK1P16333 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.12■□□□□ 0.49
NCK1P16333 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.12■□□□□ 0.49
NCK1P16333 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.12■□□□□ 0.49
NCK1P16333 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.12■□□□□ 0.49
NCK1P16333 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.12■□□□□ 0.49
NCK1P16333 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCK1P16333 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 NOC2LP1-202ENST00000452600 2235 ntBASIC18.11■□□□□ 0.49
NCK1P16333 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NCK1P16333 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.11■□□□□ 0.49
NCK1P16333 AC016769.1-201ENST00000409132 1010 ntBASIC18.11■□□□□ 0.49
NCK1P16333 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.11■□□□□ 0.49
NCK1P16333 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.11■□□□□ 0.49
NCK1P16333 BID-214ENST00000617586 542 ntTSL 5 BASIC18.11■□□□□ 0.49
NCK1P16333 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.11■□□□□ 0.49
NCK1P16333 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.11■□□□□ 0.49
NCK1P16333 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.11■□□□□ 0.49
NCK1P16333 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.11■□□□□ 0.49
NCK1P16333 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NCK1P16333 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.11■□□□□ 0.49
NCK1P16333 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.11■□□□□ 0.49
NCK1P16333 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.11■□□□□ 0.49
NCK1P16333 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms