Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH1P12830 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH1P12830 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH1P12830 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH1P12830 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH1P12830 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDH1P12830 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH1P12830 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH1P12830 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH1P12830 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH1P12830 GCSHP5-201ENST00000443090 522 ntBASIC18.7■□□□□ 0.58
CDH1P12830 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH1P12830 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.7■□□□□ 0.58
CDH1P12830 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH1P12830 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH1P12830 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH1P12830 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDH1P12830 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH1P12830 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CDH1P12830 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDH1P12830 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH1P12830 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH1P12830 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH1P12830 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH1P12830 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH1P12830 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CDH1P12830 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDH1P12830 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH1P12830 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH1P12830 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDH1P12830 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDH1P12830 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH1P12830 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH1P12830 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDH1P12830 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH1P12830 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH1P12830 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH1P12830 TMEM191A-211ENST00000637163 1067 ntBASIC18.69■□□□□ 0.58
CDH1P12830 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH1P12830 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.69■□□□□ 0.58
CDH1P12830 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDH1P12830 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CDH1P12830 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH1P12830 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CDH1P12830 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH1P12830 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH1P12830 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CDH1P12830 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CDH1P12830 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.68■□□□□ 0.58
CDH1P12830 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CDH1P12830 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.68■□□□□ 0.58
CDH1P12830 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH1P12830 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH1P12830 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH1P12830 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDH1P12830 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CDH1P12830 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CDH1P12830 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDH1P12830 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDH1P12830 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
CDH1P12830 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH1P12830 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH1P12830 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms