Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 AC113347.1-201ENST00000413321 391 ntBASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 TMPOP1-202ENST00000424642 1267 ntBASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 AL137013.1-201ENST00000432946 1228 ntBASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 AL158211.5-201ENST00000623583 2518 ntBASIC21.12■□□□□ 0.97
SRGAP2CP0DJJ0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 MIR1224-201ENST00000408193 85 ntBASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 KRT18P57-201ENST00000443599 1254 ntBASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 AC116562.4-202ENST00000641738 218 ntBASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SRGAP2CP0DJJ0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 TERF1P1-201ENST00000311003 1181 ntBASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 SLC25A1P2-201ENST00000430693 912 ntBASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 CCR12P-201ENST00000446203 998 ntBASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 AC092865.7-201ENST00000641832 219 ntBASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SRGAP2CP0DJJ0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 AC010203.1-204ENST00000548782 407 ntBASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 FAM87A-204ENST00000613235 858 ntBASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP2CP0DJJ0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.08■□□□□ 0.97
SRGAP2CP0DJJ0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SRGAP2CP0DJJ0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SRGAP2CP0DJJ0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRGAP2CP0DJJ0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SRGAP2CP0DJJ0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.08■□□□□ 0.97
SRGAP2CP0DJJ0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms