Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 RNF165-205ENST00000588679 2904 ntBASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40ALP0C0E4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.08■□□□□ 0.49
RAB40ALP0C0E4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40ALP0C0E4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40ALP0C0E4 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.08■□□□□ 0.49
RAB40ALP0C0E4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40ALP0C0E4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40ALP0C0E4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40ALP0C0E4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RAB40ALP0C0E4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40ALP0C0E4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40ALP0C0E4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB40ALP0C0E4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 AC063952.2-201ENST00000498792 1227 ntBASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 WWOX-216ENST00000569818 525 ntBASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RAB40ALP0C0E4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms