Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC24.48■■□□□ 1.51
SNRPA1P09661 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNRPA1P09661 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SNRPA1P09661 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SNRPA1P09661 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC24.47■■□□□ 1.51
SNRPA1P09661 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SNRPA1P09661 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
SNRPA1P09661 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC24.47■■□□□ 1.51
SNRPA1P09661 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC24.47■■□□□ 1.51
SNRPA1P09661 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.47■■□□□ 1.51
SNRPA1P09661 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 AL671277.2-201ENST00000458060 996 ntBASIC24.47■■□□□ 1.51
SNRPA1P09661 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.47■■□□□ 1.51
SNRPA1P09661 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.47■■□□□ 1.51
SNRPA1P09661 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.47■■□□□ 1.51
SNRPA1P09661 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.47■■□□□ 1.51
SNRPA1P09661 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
SNRPA1P09661 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.47■■□□□ 1.51
SNRPA1P09661 LINC01521-201ENST00000504184 1943 ntBASIC24.47■■□□□ 1.51
SNRPA1P09661 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRPA1P09661 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNRPA1P09661 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNRPA1P09661 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNRPA1P09661 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNRPA1P09661 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNRPA1P09661 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC24.46■■□□□ 1.51
SNRPA1P09661 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.46■■□□□ 1.51
SNRPA1P09661 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNRPA1P09661 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.46■■□□□ 1.51
SNRPA1P09661 CR769767.2-201ENST00000622735 460 ntBASIC24.46■■□□□ 1.51
SNRPA1P09661 AP000550.4-202ENST00000639755 178 ntBASIC24.46■■□□□ 1.51
SNRPA1P09661 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNRPA1P09661 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.46■■□□□ 1.51
SNRPA1P09661 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNRPA1P09661 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.46■■□□□ 1.51
SNRPA1P09661 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SNRPA1P09661 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC24.45■■□□□ 1.5
SNRPA1P09661 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SNRPA1P09661 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNRPA1P09661 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNRPA1P09661 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNRPA1P09661 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC24.45■■□□□ 1.5
SNRPA1P09661 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SNRPA1P09661 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC24.45■■□□□ 1.5
SNRPA1P09661 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SNRPA1P09661 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.45■■□□□ 1.5
SNRPA1P09661 GCSHP2-201ENST00000560971 527 ntBASIC24.45■■□□□ 1.5
SNRPA1P09661 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC24.45■■□□□ 1.5
SNRPA1P09661 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SNRPA1P09661 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.45■■□□□ 1.5
SNRPA1P09661 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.45■■□□□ 1.5
SNRPA1P09661 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SNRPA1P09661 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNRPA1P09661 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC24.45■■□□□ 1.5
SNRPA1P09661 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNRPA1P09661 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.45■■□□□ 1.5
SNRPA1P09661 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
SNRPA1P09661 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNRPA1P09661 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SNRPA1P09661 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNRPA1P09661 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.44■■□□□ 1.5
SNRPA1P09661 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNRPA1P09661 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.44■■□□□ 1.5
SNRPA1P09661 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNRPA1P09661 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNRPA1P09661 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNRPA1P09661 ILF2-202ENST00000368681 726 ntTSL 2 BASIC24.44■■□□□ 1.5
SNRPA1P09661 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNRPA1P09661 COPS8-203ENST00000409334 794 ntTSL 5 BASIC24.44■■□□□ 1.5
SNRPA1P09661 PCED1CP-201ENST00000419887 785 ntBASIC24.44■■□□□ 1.5
SNRPA1P09661 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SNRPA1P09661 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.44■■□□□ 1.5
SNRPA1P09661 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC24.44■■□□□ 1.5
SNRPA1P09661 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC24.44■■□□□ 1.5
SNRPA1P09661 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.44■■□□□ 1.5
SNRPA1P09661 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNRPA1P09661 GOLGA6L5P-202ENST00000515341 1828 ntBASIC24.44■■□□□ 1.5
SNRPA1P09661 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.44■■□□□ 1.5
SNRPA1P09661 GAS2L1P1-201ENST00000420145 1480 ntBASIC24.44■■□□□ 1.5
SNRPA1P09661 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNRPA1P09661 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC24.43■■□□□ 1.5
SNRPA1P09661 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNRPA1P09661 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC24.43■■□□□ 1.5
SNRPA1P09661 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNRPA1P09661 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNRPA1P09661 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.43■■□□□ 1.5
SNRPA1P09661 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SNRPA1P09661 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms