Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
TPM2P07951 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM2P07951 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TPM2P07951 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.78■■□□□ 1.08
TPM2P07951 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TPM2P07951 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.78■■□□□ 1.08
TPM2P07951 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM2P07951 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.78■■□□□ 1.08
TPM2P07951 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM2P07951 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.78■■□□□ 1.08
TPM2P07951 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TPM2P07951 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
TPM2P07951 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM2P07951 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.78■■□□□ 1.08
TPM2P07951 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.78■■□□□ 1.08
TPM2P07951 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.78■■□□□ 1.08
TPM2P07951 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
TPM2P07951 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TPM2P07951 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
TPM2P07951 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.78■■□□□ 1.08
TPM2P07951 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM2P07951 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM2P07951 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM2P07951 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM2P07951 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM2P07951 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC21.77■■□□□ 1.08
TPM2P07951 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM2P07951 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM2P07951 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM2P07951 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TPM2P07951 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM2P07951 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM2P07951 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM2P07951 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.77■■□□□ 1.08
TPM2P07951 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
TPM2P07951 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM2P07951 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TPM2P07951 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TPM2P07951 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TPM2P07951 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.76■■□□□ 1.07
TPM2P07951 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TPM2P07951 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TPM2P07951 KRT18P5-201ENST00000436075 1291 ntBASIC21.76■■□□□ 1.07
TPM2P07951 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.76■■□□□ 1.07
TPM2P07951 DUX4L16-201ENST00000555130 1264 ntBASIC21.76■■□□□ 1.07
TPM2P07951 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.76■■□□□ 1.07
TPM2P07951 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.76■■□□□ 1.07
TPM2P07951 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM2P07951 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.75■■□□□ 1.07
TPM2P07951 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.75■■□□□ 1.07
TPM2P07951 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TPM2P07951 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.75■■□□□ 1.07
TPM2P07951 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 CYP2T3P-201ENST00000601990 817 ntBASIC21.75■■□□□ 1.07
TPM2P07951 AC011767.1-201ENST00000617410 1153 ntBASIC21.75■■□□□ 1.07
TPM2P07951 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TPM2P07951 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.75■■□□□ 1.07
TPM2P07951 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
TPM2P07951 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM2P07951 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.75■■□□□ 1.07
TPM2P07951 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPM2P07951 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPM2P07951 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPM2P07951 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TPM2P07951 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPM2P07951 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.74■■□□□ 1.07
TPM2P07951 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPM2P07951 CNN2P6-201ENST00000439038 900 ntBASIC21.74■■□□□ 1.07
TPM2P07951 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.74■■□□□ 1.07
TPM2P07951 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPM2P07951 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.74■■□□□ 1.07
TPM2P07951 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.74■■□□□ 1.07
TPM2P07951 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.74■■□□□ 1.07
TPM2P07951 AL589743.5-201ENST00000616611 1050 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms