Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTNP04004 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.06■□□□□ 0.96
VTNP04004 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTNP04004 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTNP04004 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTNP04004 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
VTNP04004 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTNP04004 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.06■□□□□ 0.96
VTNP04004 YBX1P2-201ENST00000489612 999 ntBASIC21.06■□□□□ 0.96
VTNP04004 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
VTNP04004 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.06■□□□□ 0.96
VTNP04004 AC087388.1-201ENST00000571370 1112 ntBASIC21.06■□□□□ 0.96
VTNP04004 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTNP04004 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VTNP04004 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VTNP04004 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTNP04004 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTNP04004 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.06■□□□□ 0.96
VTNP04004 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VTNP04004 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VTNP04004 KRT8P45-201ENST00000414328 1447 ntBASIC21.05■□□□□ 0.96
VTNP04004 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VTNP04004 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTNP04004 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.05■□□□□ 0.96
VTNP04004 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
VTNP04004 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.05■□□□□ 0.96
VTNP04004 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VTNP04004 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VTNP04004 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTNP04004 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTNP04004 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTNP04004 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
VTNP04004 AC063952.2-201ENST00000498792 1227 ntBASIC21.05■□□□□ 0.96
VTNP04004 AC022616.7-201ENST00000525383 220 ntBASIC21.05■□□□□ 0.96
VTNP04004 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.05■□□□□ 0.96
VTNP04004 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.05■□□□□ 0.96
VTNP04004 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.05■□□□□ 0.96
VTNP04004 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.05■□□□□ 0.96
VTNP04004 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VTNP04004 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTNP04004 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTNP04004 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
VTNP04004 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.05■□□□□ 0.96
VTNP04004 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.05■□□□□ 0.96
VTNP04004 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTNP04004 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VTNP04004 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.04■□□□□ 0.96
VTNP04004 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.04■□□□□ 0.96
VTNP04004 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTNP04004 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
VTNP04004 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.04■□□□□ 0.96
VTNP04004 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTNP04004 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.04■□□□□ 0.96
VTNP04004 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.04■□□□□ 0.96
VTNP04004 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
VTNP04004 COX11P1-201ENST00000489116 835 ntBASIC21.04■□□□□ 0.96
VTNP04004 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.04■□□□□ 0.96
VTNP04004 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.04■□□□□ 0.96
VTNP04004 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VTNP04004 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.04■□□□□ 0.96
VTNP04004 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTNP04004 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
VTNP04004 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
VTNP04004 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTNP04004 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VTNP04004 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.04■□□□□ 0.96
VTNP04004 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.04■□□□□ 0.96
VTNP04004 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.04■□□□□ 0.96
VTNP04004 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTNP04004 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTNP04004 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.04■□□□□ 0.96
VTNP04004 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTNP04004 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.04■□□□□ 0.96
VTNP04004 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.04■□□□□ 0.96
VTNP04004 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
VTNP04004 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
VTNP04004 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
VTNP04004 TREX1-205ENST00000625293 1783 ntBASIC21.03■□□□□ 0.96
VTNP04004 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.03■□□□□ 0.96
VTNP04004 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.03■□□□□ 0.96
VTNP04004 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.03■□□□□ 0.96
VTNP04004 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.03■□□□□ 0.96
VTNP04004 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 RNF152P1-201ENST00000397754 604 ntBASIC21.03■□□□□ 0.96
VTNP04004 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.03■□□□□ 0.96
VTNP04004 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.03■□□□□ 0.96
VTNP04004 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.03■□□□□ 0.96
VTNP04004 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
VTNP04004 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.03■□□□□ 0.96
VTNP04004 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms