Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCAF4O95104 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.71■□□□□ 0.11
SCAF4O95104 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCAF4O95104 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCAF4O95104 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCAF4O95104 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.71■□□□□ 0.11
SCAF4O95104 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SCAF4O95104 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.71■□□□□ 0.11
SCAF4O95104 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCAF4O95104 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCAF4O95104 AC009113.1-201ENST00000570267 2443 ntBASIC15.71■□□□□ 0.11
SCAF4O95104 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCAF4O95104 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCAF4O95104 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.71■□□□□ 0.11
SCAF4O95104 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.71■□□□□ 0.11
SCAF4O95104 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
SCAF4O95104 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.71■□□□□ 0.11
SCAF4O95104 AC073111.5-205ENST00000641717 521 ntBASIC15.71■□□□□ 0.11
SCAF4O95104 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCAF4O95104 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SCAF4O95104 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SCAF4O95104 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.71■□□□□ 0.1
SCAF4O95104 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
SCAF4O95104 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
SCAF4O95104 AL133373.2-201ENST00000623187 2828 ntBASIC15.71■□□□□ 0.1
SCAF4O95104 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SCAF4O95104 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.71■□□□□ 0.1
SCAF4O95104 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.7■□□□□ 0.1
SCAF4O95104 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SCAF4O95104 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.7■□□□□ 0.1
SCAF4O95104 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SCAF4O95104 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SCAF4O95104 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
SCAF4O95104 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.7■□□□□ 0.1
SCAF4O95104 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.7■□□□□ 0.1
SCAF4O95104 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.7■□□□□ 0.1
SCAF4O95104 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.7■□□□□ 0.1
SCAF4O95104 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.7■□□□□ 0.1
SCAF4O95104 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
SCAF4O95104 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.7■□□□□ 0.1
SCAF4O95104 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
SCAF4O95104 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SCAF4O95104 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.7■□□□□ 0.1
SCAF4O95104 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SCAF4O95104 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.7■□□□□ 0.1
SCAF4O95104 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.7■□□□□ 0.1
SCAF4O95104 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.7■□□□□ 0.1
SCAF4O95104 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCAF4O95104 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCAF4O95104 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCAF4O95104 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.69■□□□□ 0.1
SCAF4O95104 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCAF4O95104 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.69■□□□□ 0.1
SCAF4O95104 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCAF4O95104 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.69■□□□□ 0.1
SCAF4O95104 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SCAF4O95104 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCAF4O95104 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.69■□□□□ 0.1
SCAF4O95104 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.69■□□□□ 0.1
SCAF4O95104 TERF1P5-201ENST00000477545 1207 ntBASIC15.69■□□□□ 0.1
SCAF4O95104 AC090192.1-201ENST00000517740 490 ntBASIC15.69■□□□□ 0.1
SCAF4O95104 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.69■□□□□ 0.1
SCAF4O95104 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.69■□□□□ 0.1
SCAF4O95104 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.69■□□□□ 0.1
SCAF4O95104 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCAF4O95104 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCAF4O95104 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCAF4O95104 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.69■□□□□ 0.1
SCAF4O95104 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.69■□□□□ 0.1
SCAF4O95104 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SCAF4O95104 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SCAF4O95104 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 PTBP1P-201ENST00000554374 1601 ntBASIC15.68■□□□□ 0.1
SCAF4O95104 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.68■□□□□ 0.1
SCAF4O95104 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SCAF4O95104 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SCAF4O95104 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
SCAF4O95104 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.68■□□□□ 0.1
SCAF4O95104 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.68■□□□□ 0.1
SCAF4O95104 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.68■□□□□ 0.1
SCAF4O95104 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.68■□□□□ 0.1
SCAF4O95104 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms