Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-2O95096 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-2O95096 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
NKX2-2O95096 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NKX2-2O95096 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-2O95096 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-2O95096 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.74■□□□□ 0.43
NKX2-2O95096 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-2O95096 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-2O95096 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.73■□□□□ 0.43
NKX2-2O95096 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-2O95096 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-2O95096 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX2-2O95096 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-2O95096 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NKX2-2O95096 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-2O95096 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NKX2-2O95096 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-2O95096 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.73■□□□□ 0.43
NKX2-2O95096 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
NKX2-2O95096 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-2O95096 AC026271.3-201ENST00000571884 352 ntBASIC17.73■□□□□ 0.43
NKX2-2O95096 CR392000.1-201ENST00000624770 1228 ntBASIC17.73■□□□□ 0.43
NKX2-2O95096 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.73■□□□□ 0.43
NKX2-2O95096 AL031985.4-201ENST00000642138 673 ntBASIC17.73■□□□□ 0.43
NKX2-2O95096 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
NKX2-2O95096 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NKX2-2O95096 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.73■□□□□ 0.43
NKX2-2O95096 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX2-2O95096 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.73■□□□□ 0.43
NKX2-2O95096 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-2O95096 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-2O95096 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-2O95096 AL049812.1-201ENST00000432563 2267 ntBASIC17.73■□□□□ 0.43
NKX2-2O95096 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX2-2O95096 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-2O95096 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-2O95096 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NKX2-2O95096 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NKX2-2O95096 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
NKX2-2O95096 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX2-2O95096 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.72■□□□□ 0.43
NKX2-2O95096 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NKX2-2O95096 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NKX2-2O95096 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.72■□□□□ 0.43
NKX2-2O95096 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX2-2O95096 TMEM191A-211ENST00000637163 1067 ntBASIC17.72■□□□□ 0.43
NKX2-2O95096 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.72■□□□□ 0.43
NKX2-2O95096 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.72■□□□□ 0.43
NKX2-2O95096 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-2O95096 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
NKX2-2O95096 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
NKX2-2O95096 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX2-2O95096 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NKX2-2O95096 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX2-2O95096 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX2-2O95096 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
NKX2-2O95096 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX2-2O95096 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.71■□□□□ 0.43
NKX2-2O95096 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.71■□□□□ 0.43
NKX2-2O95096 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.71■□□□□ 0.43
NKX2-2O95096 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-2O95096 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NKX2-2O95096 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NKX2-2O95096 AC087289.5-201ENST00000586076 3175 ntBASIC17.71■□□□□ 0.42
NKX2-2O95096 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
NKX2-2O95096 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
NKX2-2O95096 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NKX2-2O95096 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.71■□□□□ 0.42
NKX2-2O95096 RCC2P6-201ENST00000526625 1557 ntBASIC17.7■□□□□ 0.42
NKX2-2O95096 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms