Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL353807.1-201ENST00000427475 662 ntBASIC18.22■□□□□ 0.51
PROM1O43490 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.22■□□□□ 0.51
PROM1O43490 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.22■□□□□ 0.51
PROM1O43490 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.22■□□□□ 0.51
PROM1O43490 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.22■□□□□ 0.51
PROM1O43490 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.22■□□□□ 0.51
PROM1O43490 AL445675.2-201ENST00000620291 557 ntBASIC18.22■□□□□ 0.51
PROM1O43490 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.22■□□□□ 0.51
PROM1O43490 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PROM1O43490 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.22■□□□□ 0.51
PROM1O43490 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PROM1O43490 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PROM1O43490 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PROM1O43490 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PROM1O43490 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
PROM1O43490 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PROM1O43490 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
PROM1O43490 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.21■□□□□ 0.51
PROM1O43490 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PROM1O43490 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
PROM1O43490 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 AP002982.1-201ENST00000492365 877 ntBASIC18.21■□□□□ 0.51
PROM1O43490 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.21■□□□□ 0.51
PROM1O43490 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.21■□□□□ 0.51
PROM1O43490 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.21■□□□□ 0.51
PROM1O43490 AF186192.3-201ENST00000583427 947 ntBASIC18.21■□□□□ 0.51
PROM1O43490 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PROM1O43490 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PROM1O43490 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.21■□□□□ 0.51
PROM1O43490 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PROM1O43490 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.2■□□□□ 0.5
PROM1O43490 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
PROM1O43490 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 TEX21P-204ENST00000641479 1693 ntBASIC18.2■□□□□ 0.5
PROM1O43490 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PROM1O43490 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.2■□□□□ 0.5
PROM1O43490 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PROM1O43490 KSR1P1-201ENST00000446298 240 ntBASIC18.2■□□□□ 0.5
PROM1O43490 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.2■□□□□ 0.5
PROM1O43490 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 RPS2P4-201ENST00000476944 856 ntBASIC18.2■□□□□ 0.5
PROM1O43490 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.2■□□□□ 0.5
PROM1O43490 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.2■□□□□ 0.5
PROM1O43490 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.2■□□□□ 0.5
PROM1O43490 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PROM1O43490 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PROM1O43490 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PROM1O43490 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.2■□□□□ 0.5
PROM1O43490 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PROM1O43490 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.2■□□□□ 0.5
PROM1O43490 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PROM1O43490 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.19■□□□□ 0.5
PROM1O43490 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.19■□□□□ 0.5
PROM1O43490 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PROM1O43490 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 AL596275.1-201ENST00000423464 877 ntBASIC18.19■□□□□ 0.5
PROM1O43490 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.19■□□□□ 0.5
PROM1O43490 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.19■□□□□ 0.5
PROM1O43490 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.19■□□□□ 0.5
PROM1O43490 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PROM1O43490 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms