Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
UBFD1O14562 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.64■□□□□ 0.57
UBFD1O14562 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.64■□□□□ 0.57
UBFD1O14562 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.64■□□□□ 0.57
UBFD1O14562 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.64■□□□□ 0.57
UBFD1O14562 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.64■□□□□ 0.57
UBFD1O14562 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBFD1O14562 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBFD1O14562 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBFD1O14562 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBFD1O14562 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBFD1O14562 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBFD1O14562 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBFD1O14562 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.63■□□□□ 0.57
UBFD1O14562 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
UBFD1O14562 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBFD1O14562 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.63■□□□□ 0.57
UBFD1O14562 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBFD1O14562 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBFD1O14562 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBFD1O14562 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBFD1O14562 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBFD1O14562 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBFD1O14562 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBFD1O14562 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
UBFD1O14562 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.63■□□□□ 0.57
UBFD1O14562 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBFD1O14562 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.63■□□□□ 0.57
UBFD1O14562 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBFD1O14562 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.63■□□□□ 0.57
UBFD1O14562 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.63■□□□□ 0.57
UBFD1O14562 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBFD1O14562 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.63■□□□□ 0.57
UBFD1O14562 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.63■□□□□ 0.57
UBFD1O14562 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.62■□□□□ 0.57
UBFD1O14562 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
UBFD1O14562 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBFD1O14562 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 AC069152.1-201ENST00000438030 544 ntBASIC18.62■□□□□ 0.57
UBFD1O14562 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.62■□□□□ 0.57
UBFD1O14562 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.62■□□□□ 0.57
UBFD1O14562 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
UBFD1O14562 AL109923.1-201ENST00000618799 583 ntBASIC18.62■□□□□ 0.57
UBFD1O14562 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UBFD1O14562 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
UBFD1O14562 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.62■□□□□ 0.57
UBFD1O14562 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
UBFD1O14562 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
UBFD1O14562 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 AC005082.1-201ENST00000413042 2259 ntBASIC18.62■□□□□ 0.57
UBFD1O14562 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UBFD1O14562 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBFD1O14562 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBFD1O14562 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.61■□□□□ 0.57
UBFD1O14562 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBFD1O14562 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBFD1O14562 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBFD1O14562 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBFD1O14562 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBFD1O14562 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.61■□□□□ 0.57
UBFD1O14562 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.61■□□□□ 0.57
UBFD1O14562 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBFD1O14562 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBFD1O14562 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBFD1O14562 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.61■□□□□ 0.57
UBFD1O14562 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBFD1O14562 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBFD1O14562 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
UBFD1O14562 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBFD1O14562 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.61■□□□□ 0.57
UBFD1O14562 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.61■□□□□ 0.57
UBFD1O14562 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.61■□□□□ 0.57
UBFD1O14562 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.61■□□□□ 0.57
UBFD1O14562 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.61■□□□□ 0.57
UBFD1O14562 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
UBFD1O14562 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
UBFD1O14562 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBFD1O14562 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
UBFD1O14562 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
UBFD1O14562 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.61■□□□□ 0.57
UBFD1O14562 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBFD1O14562 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBFD1O14562 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
UBFD1O14562 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBFD1O14562 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UBFD1O14562 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms