Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN4O14493 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN4O14493 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLDN4O14493 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN4O14493 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN4O14493 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN4O14493 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN4O14493 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN4O14493 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN4O14493 AL596275.1-201ENST00000423464 877 ntBASIC18.09■□□□□ 0.49
CLDN4O14493 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN4O14493 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.09■□□□□ 0.49
CLDN4O14493 AC011298.2-201ENST00000617989 482 ntBASIC18.09■□□□□ 0.49
CLDN4O14493 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN4O14493 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CLDN4O14493 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLDN4O14493 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN4O14493 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN4O14493 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLDN4O14493 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
CLDN4O14493 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN4O14493 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN4O14493 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLDN4O14493 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN4O14493 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN4O14493 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.08■□□□□ 0.49
CLDN4O14493 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN4O14493 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN4O14493 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN4O14493 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CLDN4O14493 Z82202.1-201ENST00000623446 1880 ntBASIC18.08■□□□□ 0.49
CLDN4O14493 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN4O14493 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN4O14493 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CLDN4O14493 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN4O14493 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN4O14493 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN4O14493 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.08■□□□□ 0.48
CLDN4O14493 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN4O14493 B3GAT3P1-201ENST00000471720 806 ntBASIC18.08■□□□□ 0.48
CLDN4O14493 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.08■□□□□ 0.48
CLDN4O14493 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CLDN4O14493 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CLDN4O14493 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.08■□□□□ 0.48
CLDN4O14493 AC130371.2-201ENST00000619443 611 ntBASIC18.08■□□□□ 0.48
CLDN4O14493 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN4O14493 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLDN4O14493 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN4O14493 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN4O14493 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN4O14493 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN4O14493 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN4O14493 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN4O14493 SDHAP1-207ENST00000440850 2000 ntBASIC18.07■□□□□ 0.48
CLDN4O14493 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 UNC93B2-201ENST00000285383 730 ntBASIC18.07■□□□□ 0.48
CLDN4O14493 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CLDN4O14493 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.07■□□□□ 0.48
CLDN4O14493 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.07■□□□□ 0.48
CLDN4O14493 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CLDN4O14493 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN4O14493 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.07■□□□□ 0.48
CLDN4O14493 DGCR10-201ENST00000609839 495 ntBASIC18.07■□□□□ 0.48
CLDN4O14493 REXO1L10P-201ENST00000615707 1290 ntBASIC18.07■□□□□ 0.48
CLDN4O14493 REXO1L12P-201ENST00000622156 912 ntBASIC18.07■□□□□ 0.48
CLDN4O14493 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLDN4O14493 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDN4O14493 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN4O14493 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN4O14493 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN4O14493 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN4O14493 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CLDN4O14493 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN4O14493 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLDN4O14493 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN4O14493 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN4O14493 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN4O14493 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLDN4O14493 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN4O14493 TSPY21P-201ENST00000433481 731 ntBASIC18.06■□□□□ 0.48
CLDN4O14493 FAM207BP-201ENST00000447172 505 ntBASIC18.06■□□□□ 0.48
CLDN4O14493 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN4O14493 AC011506.1-201ENST00000474329 610 ntBASIC18.06■□□□□ 0.48
CLDN4O14493 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN4O14493 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CLDN4O14493 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.06■□□□□ 0.48
CLDN4O14493 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.06■□□□□ 0.48
CLDN4O14493 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms