Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN3O00409 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.56■□□□□ 0.88
FOXN3O00409 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN3O00409 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXN3O00409 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXN3O00409 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.56■□□□□ 0.88
FOXN3O00409 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXN3O00409 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.56■□□□□ 0.88
FOXN3O00409 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN3O00409 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXN3O00409 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN3O00409 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN3O00409 CROCCP3-202ENST00000420820 1947 ntBASIC20.56■□□□□ 0.88
FOXN3O00409 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN3O00409 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN3O00409 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXN3O00409 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN3O00409 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN3O00409 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN3O00409 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
FOXN3O00409 FEM1AP3-201ENST00000403722 1741 ntBASIC20.56■□□□□ 0.88
FOXN3O00409 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXN3O00409 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
FOXN3O00409 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXN3O00409 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
FOXN3O00409 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXN3O00409 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
FOXN3O00409 TSPY20P-201ENST00000450910 630 ntBASIC20.55■□□□□ 0.88
FOXN3O00409 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXN3O00409 C1QBPP2-201ENST00000528754 825 ntBASIC20.55■□□□□ 0.88
FOXN3O00409 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXN3O00409 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXN3O00409 RNF165-205ENST00000588679 2904 ntBASIC20.55■□□□□ 0.88
FOXN3O00409 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXN3O00409 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN3O00409 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXN3O00409 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
FOXN3O00409 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN3O00409 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXN3O00409 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN3O00409 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
FOXN3O00409 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.54■□□□□ 0.88
FOXN3O00409 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXN3O00409 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.54■□□□□ 0.88
FOXN3O00409 RPPH1-201ENST00000516869 333 ntBASIC20.54■□□□□ 0.88
FOXN3O00409 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXN3O00409 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.54■□□□□ 0.88
FOXN3O00409 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXN3O00409 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.54■□□□□ 0.88
FOXN3O00409 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
FOXN3O00409 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN3O00409 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN3O00409 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN3O00409 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN3O00409 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
FOXN3O00409 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN3O00409 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN3O00409 KRT8P41-201ENST00000533985 1514 ntBASIC20.53■□□□□ 0.88
FOXN3O00409 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXN3O00409 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN3O00409 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.53■□□□□ 0.88
FOXN3O00409 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXN3O00409 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
FOXN3O00409 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN3O00409 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN3O00409 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXN3O00409 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN3O00409 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN3O00409 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN3O00409 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN3O00409 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.53■□□□□ 0.88
FOXN3O00409 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXN3O00409 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN3O00409 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.52■□□□□ 0.88
FOXN3O00409 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN3O00409 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN3O00409 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN3O00409 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN3O00409 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN3O00409 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN3O00409 FAM201B-201ENST00000458407 597 ntBASIC20.52■□□□□ 0.88
FOXN3O00409 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
FOXN3O00409 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
FOXN3O00409 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
FOXN3O00409 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
FOXN3O00409 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
FOXN3O00409 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.52■□□□□ 0.87
FOXN3O00409 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms