Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.47■□□□□ 0.87
O00370 Z85996.1-201ENST00000494644 937 ntBASIC20.47■□□□□ 0.87
O00370 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
O00370 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.47■□□□□ 0.87
O00370 CR392000.1-201ENST00000624770 1228 ntBASIC20.47■□□□□ 0.87
O00370 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.47■□□□□ 0.87
O00370 AP006294.2-201ENST00000641667 209 ntBASIC20.47■□□□□ 0.87
O00370 AL049637.2-201ENST00000641778 930 ntBASIC20.47■□□□□ 0.87
O00370 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
O00370 TNXA-203ENST00000507684 2038 ntBASIC20.47■□□□□ 0.87
O00370 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.47■□□□□ 0.87
O00370 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
O00370 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.47■□□□□ 0.87
O00370 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
O00370 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.47■□□□□ 0.87
O00370 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
O00370 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
O00370 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.46■□□□□ 0.87
O00370 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
O00370 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.46■□□□□ 0.87
O00370 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.46■□□□□ 0.87
O00370 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
O00370 FAM197Y1-201ENST00000421178 764 ntBASIC20.46■□□□□ 0.87
O00370 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.46■□□□□ 0.87
O00370 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.46■□□□□ 0.87
O00370 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
O00370 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.46■□□□□ 0.87
O00370 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
O00370 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.46■□□□□ 0.87
O00370 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
O00370 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.45■□□□□ 0.86
O00370 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
O00370 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
O00370 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
O00370 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
O00370 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.45■□□□□ 0.86
O00370 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
O00370 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.45■□□□□ 0.86
O00370 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
O00370 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
O00370 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.45■□□□□ 0.86
O00370 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.45■□□□□ 0.86
O00370 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
O00370 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.45■□□□□ 0.86
O00370 CD177P1-201ENST00000606252 935 ntBASIC20.45■□□□□ 0.86
O00370 AC131212.4-201ENST00000623606 975 ntBASIC20.45■□□□□ 0.86
O00370 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
O00370 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
O00370 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.45■□□□□ 0.86
O00370 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
O00370 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.45■□□□□ 0.86
O00370 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
O00370 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
O00370 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
O00370 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
O00370 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
O00370 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
O00370 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.44■□□□□ 0.86
O00370 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
O00370 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
O00370 MIR718-201ENST00000390190 70 ntBASIC20.44■□□□□ 0.86
O00370 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.44■□□□□ 0.86
O00370 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.44■□□□□ 0.86
O00370 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.44■□□□□ 0.86
O00370 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.44■□□□□ 0.86
O00370 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.44■□□□□ 0.86
O00370 AP001412.1-201ENST00000608405 714 ntBASIC20.44■□□□□ 0.86
O00370 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.44■□□□□ 0.86
O00370 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.44■□□□□ 0.86
O00370 AC066615.1-201ENST00000640911 628 ntBASIC20.44■□□□□ 0.86
O00370 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
O00370 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
O00370 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
O00370 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
O00370 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.44■□□□□ 0.86
O00370 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms