Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 AC006015.1-201ENST00000429970 570 ntBASIC17.76■□□□□ 0.43
TNFRSF11BO00300 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 KRT18P5-201ENST00000436075 1291 ntBASIC17.76■□□□□ 0.43
TNFRSF11BO00300 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 AC087623.3-201ENST00000607047 1098 ntBASIC17.76■□□□□ 0.43
TNFRSF11BO00300 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 AL512353.2-201ENST00000448759 1962 ntBASIC17.76■□□□□ 0.43
TNFRSF11BO00300 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 AC018470.1-201ENST00000624790 3129 ntBASIC17.76■□□□□ 0.43
TNFRSF11BO00300 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF11BO00300 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.75■□□□□ 0.43
TNFRSF11BO00300 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 AL390719.1-204ENST00000412397 1219 ntBASIC17.75■□□□□ 0.43
TNFRSF11BO00300 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 MIR6821-201ENST00000617625 74 ntBASIC17.75■□□□□ 0.43
TNFRSF11BO00300 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFRSF11BO00300 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.74■□□□□ 0.43
TNFRSF11BO00300 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms