Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMX2-CTNND1H3BSU7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TMX2-CTNND1H3BSU7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMX2-CTNND1H3BSU7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMX2-CTNND1H3BSU7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.83■□□□□ 0.61
TMX2-CTNND1H3BSU7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMX2-CTNND1H3BSU7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMX2-CTNND1H3BSU7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
TMX2-CTNND1H3BSU7 TSPY14P-201ENST00000303979 915 ntBASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 KRT18P57-201ENST00000443599 1254 ntBASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.83■□□□□ 0.6
TMX2-CTNND1H3BSU7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC097488.1-201ENST00000507834 756 ntBASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 DPP3P2-201ENST00000416030 1696 ntBASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMX2-CTNND1H3BSU7 AL158211.5-201ENST00000623583 2518 ntBASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC005082.1-201ENST00000413042 2259 ntBASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 MESTP1-201ENST00000404287 994 ntBASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC018553.1-201ENST00000616682 1458 ntBASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC007613.1-201ENST00000572811 2597 ntBASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TMX2-CTNND1H3BSU7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms