Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VGLL3A8MV65 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.84■□□□□ 0.61
VGLL3A8MV65 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VGLL3A8MV65 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VGLL3A8MV65 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VGLL3A8MV65 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VGLL3A8MV65 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VGLL3A8MV65 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VGLL3A8MV65 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VGLL3A8MV65 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VGLL3A8MV65 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
VGLL3A8MV65 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VGLL3A8MV65 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.83■□□□□ 0.61
VGLL3A8MV65 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.83■□□□□ 0.61
VGLL3A8MV65 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VGLL3A8MV65 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VGLL3A8MV65 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.61
VGLL3A8MV65 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VGLL3A8MV65 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL3A8MV65 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL3A8MV65 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.83■□□□□ 0.6
VGLL3A8MV65 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.83■□□□□ 0.6
VGLL3A8MV65 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL3A8MV65 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
VGLL3A8MV65 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL3A8MV65 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.83■□□□□ 0.6
VGLL3A8MV65 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL3A8MV65 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.83■□□□□ 0.6
VGLL3A8MV65 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL3A8MV65 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL3A8MV65 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.83■□□□□ 0.6
VGLL3A8MV65 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL3A8MV65 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL3A8MV65 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VGLL3A8MV65 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VGLL3A8MV65 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VGLL3A8MV65 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 AC008764.6-201ENST00000595909 2069 ntBASIC18.81■□□□□ 0.6
VGLL3A8MV65 DOC2GP-204ENST00000639052 2548 ntBASIC18.81■□□□□ 0.6
VGLL3A8MV65 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
VGLL3A8MV65 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VGLL3A8MV65 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.8■□□□□ 0.6
VGLL3A8MV65 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms