Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 AL355472.2-201ENST00000422958 438 ntBASIC20.73■□□□□ 0.91
CCDC66A2RUB6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 AC010980.2-201ENST00000587099 1412 ntBASIC20.72■□□□□ 0.91
CCDC66A2RUB6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 AC007322.1-201ENST00000426983 750 ntBASIC20.72■□□□□ 0.91
CCDC66A2RUB6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 C2orf69P4-201ENST00000565394 541 ntBASIC20.72■□□□□ 0.91
CCDC66A2RUB6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC66A2RUB6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 AC011270.2-201ENST00000624293 2550 ntBASIC20.71■□□□□ 0.91
CCDC66A2RUB6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 TNRC18P3-201ENST00000441896 2691 ntBASIC20.71■□□□□ 0.91
CCDC66A2RUB6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC66A2RUB6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms