Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC78A2IDD5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 AL161938.1-201ENST00000569833 2180 ntBASIC19.43■□□□□ 0.7
CCDC78A2IDD5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC78A2IDD5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 TNXA-203ENST00000507684 2038 ntBASIC19.42■□□□□ 0.7
CCDC78A2IDD5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC78A2IDD5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 AC128676.1-201ENST00000454392 318 ntBASIC19.41■□□□□ 0.7
CCDC78A2IDD5 FAM201B-201ENST00000458407 597 ntBASIC19.41■□□□□ 0.7
CCDC78A2IDD5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC78A2IDD5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 POU5F1P3-201ENST00000428824 1078 ntBASIC19.4■□□□□ 0.7
CCDC78A2IDD5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms