Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 FAM201B-201ENST00000458407 597 ntBASIC17.54■□□□□ 0.4
ZC3H12DA2A288 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.54■□□□□ 0.4
ZC3H12DA2A288 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.53■□□□□ 0.4
ZC3H12DA2A288 AL049812.1-201ENST00000432563 2267 ntBASIC17.52■□□□□ 0.4
ZC3H12DA2A288 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 C1QBPP2-201ENST00000528754 825 ntBASIC17.52■□□□□ 0.4
ZC3H12DA2A288 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZC3H12DA2A288 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZC3H12DA2A288 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZC3H12DA2A288 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.39
ZC3H12DA2A288 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.52■□□□□ 0.39
ZC3H12DA2A288 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ZC3H12DA2A288 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZC3H12DA2A288 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZC3H12DA2A288 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
ZC3H12DA2A288 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ZC3H12DA2A288 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZC3H12DA2A288 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZC3H12DA2A288 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.51■□□□□ 0.39
ZC3H12DA2A288 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.51■□□□□ 0.39
ZC3H12DA2A288 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.51■□□□□ 0.39
ZC3H12DA2A288 AC104417.2-201ENST00000562989 1793 ntBASIC17.51■□□□□ 0.39
ZC3H12DA2A288 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZC3H12DA2A288 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.51■□□□□ 0.39
ZC3H12DA2A288 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZC3H12DA2A288 SDHAP1-207ENST00000440850 2000 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms