Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC00959A0A1B0GUT2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00959A0A1B0GUT2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00959A0A1B0GUT2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00959A0A1B0GUT2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
LINC00959A0A1B0GUT2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 AC097658.1-201ENST00000475555 843 ntBASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 MIR4758-201ENST00000577688 71 ntBASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 HLA-B-256ENST00000639848 1089 ntBASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.09□□□□□ -0.31
LINC00959A0A1B0GUT2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00959A0A1B0GUT2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
LINC00959A0A1B0GUT2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00959A0A1B0GUT2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 NEFHP1-201ENST00000412845 2629 ntBASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 FP475955.4-201ENST00000623131 1990 ntBASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 IRX1P1-201ENST00000438849 1838 ntBASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00959A0A1B0GUT2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 TUBB8P6-201ENST00000436895 1288 ntBASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00959A0A1B0GUT2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms