Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRBV5-3A0A0A0MS03 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 NCF1B-203ENST00000435988 1254 ntBASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 AC097658.1-201ENST00000475555 843 ntBASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 MIR4758-201ENST00000577688 71 ntBASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 AC083880.1-201ENST00000608266 535 ntBASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 AC026471.1-201ENST00000564629 3026 ntBASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TRBV5-3A0A0A0MS03 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 AC006970.2-201ENST00000450065 779 ntBASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.99■□□□□ 0.47
TRBV5-3A0A0A0MS03 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 SLC29A4P1-201ENST00000398760 971 ntBASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 NOC2LP1-202ENST00000452600 2235 ntBASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-3A0A0A0MS03 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-3A0A0A0MS03 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-3A0A0A0MS03 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-3A0A0A0MS03 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-3A0A0A0MS03 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-3A0A0A0MS03 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRBV5-3A0A0A0MS03 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-3A0A0A0MS03 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-3A0A0A0MS03 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms